Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 93.3 3e-14
seq59939 87.8 1e-12
>seq152719
Length=2073
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||| ||||| |||||||||||| || ||| |||| ||||
Sbjct 63 CAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTCCA 122
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || ||||| || |||| || ||| || || ||||| | |||||||| ||| |
Sbjct 123 GCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGA 182
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || || || | | | | |||| | || ||||||| || || | ||| |
Sbjct 183 TCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATGGACTTAC 242
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| ||||| |||||||||||||| |||||
Sbjct 243 CAGTCAGGGTCTTCACAAAGATCTGCAT 270
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|| ||||| ||||| || || || |||| | || ||||| || || ||||| ||
Sbjct 536 TCTTTCTGGATGTTATAATCTGACATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAG 595
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|||| || ||| || || ||||| | |||||||| ||| || || || || |
Sbjct 596 ATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTTAGCTTTTACATTC 655
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | |||| | || ||||||| || || ||||| || ||||| |||||||||
Sbjct 656 TCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACA 715
Query 45326 AAGATTTGCATGTTG 45340
||||| ||||| |||
Sbjct 716 AAGATCTGCATCTTG 730
>seq59939
Length=800
Score = 87.8 bits (96), Expect = 1e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241
|| ||||| || |||||||| || |||| || ||| || || || || | || ||||||
Sbjct 11 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 70
Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301
||| || || ||| || | | |||| | | ||| ||||| | ||| ||
Sbjct 71 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGATG 130
Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||||||||| || |||||||||||||| ||||||||
Sbjct 131 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 392544918905542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |