Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq496362 208 7e-49 >seq496362 Length=882 Score = 208 bits (230), Expect = 7e-49 Identities = 526/789 (67%), Gaps = 37/789 (5%) Strand=Plus/Minus Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGT--TGACATAAACACTTTATCACAAC 14018 ||||| || | |||||||| || ||||| |||| || || ||| || | |||| Sbjct 879 AGTGAAATCATGTCCATAAAGTCGAATGGGTTTGGCGTGTTGTATTCACGTT--CGCAAC 822 Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078 ||||||||| || | |||||| | | ||||| | |||||| | |||||||| || Sbjct 821 CTAGTTCTACTAAAAGTCTATCGGTTACAAACTCTAAATATTGCGTCATTAAATTCGCAT 762 Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138 ||||||| |||| ||||||||| | | || | ||||||| |||| || | | Sbjct 761 TCATACCAATTAAACTTACAGGAAGTGATTCTGTAATAAATTCTCTTTCGATGTTTAAGG 702 Query 14139 CCTCGTTTATAATAATCGTAATAATT---TCATTAGAAGGAGGATATTTTA-----GATG 14190 | || |||||||| || | ||| || || | | | ||||| |||| Sbjct 701 CGTCA---ATAATAATGGTTCTGATTCTGTCTTTTG--GCACTTTATTTACCAAGTGATG 647 Query 14191 TT--TAAAAATTAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTC 14247 || | |||| ||| || |||||||| |||| || || || | | ||| | ||| Sbjct 646 TTGGTGCAAATG---CACTGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTC 590 Query 14248 GTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAA 14307 |||||| ||||| |||||||||||||| ||||||||||| ||||| || || | | || Sbjct 589 GTTTGAGAATGTCAATCCTGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAA 530 Query 14308 TGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGA 14367 | || || ||||| ||||| || ||||| ||||| || || ||||| ||| | || || Sbjct 529 AGCACCTGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAAGA 470 Query 14368 TGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCAT 14427 || | ||||||| | ||||| || | ||| ||||| ||| | | Sbjct 469 ATCTGAAT------CAATCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAA 416 Query 14428 TGTTTCAATAGCATTAAATAAATGTTCCTTCTCT--TTAGTACTTGAAATGTATGTATCA 14485 ||| | || || ||||||| | |||||| || || || | | || || || Sbjct 415 AACTTCTAATGCGTTGAATAAATCGGCTTTCTCTGCTTCGTCTTTTACA--TAAGTGTCG 358 Query 14486 ATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAA 14544 || | ||| |||| |||| ||| || |||||||| || || |||||||| ||| Sbjct 357 ATTAACAAGGAATACGTTTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAA 298 Query 14545 ACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14604 || | ||||| | |||| || || ||| |||| || | ||||||||| || Sbjct 297 GAATTTCGCTTCAGCATATTGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTAC 238 Query 14605 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14664 || || || ||| || |||||||| || |||| ||| ||||||||||| || || || Sbjct 237 AATTCCGTCTGAAGCGGCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTT 178 Query 14665 GCTGA---GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14721 | | || ||||| ||| |||||| | || | ||| | ||| || | ||||| Sbjct 177 ATTCAACTTGTTATTCCAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCA 118 Query 14722 AAAACTAGC 14730 ||||| || Sbjct 117 GAAACTCGC 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479177180281360