Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_003298.1 Length=38208 Score E Sequences producing significant alignments: (Bits) Value seq512931 152 1e-32 >seq512931 Length=538 Score = 152 bits (168), Expect = 1e-32 Identities = 352/525 (67%), Gaps = 38/525 (7%) Strand=Plus/Plus Query 35990 CCTGACCACTCTCCGTCTGTGAAGTCGGTGGGTATCACTGGTCAGT-TGACTGGTAGCCG 36048 ||||||||| || || |||||||| |||||| | ||||| | || ||||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 36049 TGCTGATATCATCATAGCGGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGC 36108 |||||| ||| |||| ||||||||||||||| | || ||||| | || || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 36109 CCGTGAGAAGCTGTGGACTCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCGCTGCCGAC 36168 | || | || | ||||| ||||||| | |||| | ||||| | ||| || Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGC--CTGACG-- 184 Query 36169 CTCTCGCGTTATCTACCTTGGTACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGA 36228 | | |||||| | || || || || |||||||||||| | |||| |||||| || Sbjct 185 --GTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242 Query 36229 AGATAACCGTGGGTACACCACAATCATCTGGCCTGCGCTCTATCCGCG---------TAG 36279 | |||| || ||| | || | ||||||||||| | || || || | Sbjct 243 GG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299 Query 36280 CCGTGAGGAAGACTTGTA--CTATGGTGA-------ACGTCTGGCCC---CTATGCTCCG 36327 || |||| ||| | | | | || | |||||||| || | |||||| Sbjct 300 CCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC-- 357 Query 36328 TGAGGAGTTCAACGATGGGTTCGAGATGCTCCAAGGCCAACCAACTGACCCCGTGCGATT 36387 ||||| | | || | ||||| ||| | | || || ||||| | ||||| Sbjct 358 -AAGGAGCTGGAAGACG---ACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATT 413 Query 36388 CGACATGGAAGACCTACGGGAACGTGAGTTGGAATACGGTAAGGCTGGCTTCACTTTACA 36447 ||| |||||||| || || || || | ||| || |||| ||||||| || |||| Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473 Query 36448 GTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCCCTT 36492 ||||||||| |||||||||||||| || |||||||||||| || Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121381780369080