Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_003298.1
Length=38208
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 152 1e-32
>seq512931
Length=538
Score = 152 bits (168), Expect = 1e-32
Identities = 352/525 (67%), Gaps = 38/525 (7%)
Strand=Plus/Plus
Query 35990 CCTGACCACTCTCCGTCTGTGAAGTCGGTGGGTATCACTGGTCAGT-TGACTGGTAGCCG 36048
||||||||| || || |||||||| |||||| | ||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 36049 TGCTGATATCATCATAGCGGATGACGTTGAGATTCCGTCTAACTCCGCAACTCAAGGTGC 36108
|||||| ||| |||| ||||||||||||||| | || ||||| | || || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 36109 CCGTGAGAAGCTGTGGACTCTGGTGCAGGAATTTGCTGCGCTTCTGAAACCGCTGCCGAC 36168
| || | || | ||||| ||||||| | |||| | ||||| | ||| ||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGC--CTGACG-- 184
Query 36169 CTCTCGCGTTATCTACCTTGGTACGCCTCAAACCGAAATGACCTTGTACAAGGAACTCGA 36228
| | |||||| | || || || || |||||||||||| | |||| |||||| ||
Sbjct 185 --GTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGA 242
Query 36229 AGATAACCGTGGGTACACCACAATCATCTGGCCTGCGCTCTATCCGCG---------TAG 36279
| |||| || ||| | || | ||||||||||| | || || || |
Sbjct 243 GG---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGA 299
Query 36280 CCGTGAGGAAGACTTGTA--CTATGGTGA-------ACGTCTGGCCC---CTATGCTCCG 36327
|| |||| ||| | | | | || | |||||||| || | ||||||
Sbjct 300 CCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC-- 357
Query 36328 TGAGGAGTTCAACGATGGGTTCGAGATGCTCCAAGGCCAACCAACTGACCCCGTGCGATT 36387
||||| | | || | ||||| ||| | | || || ||||| | |||||
Sbjct 358 -AAGGAGCTGGAAGACG---ACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATT 413
Query 36388 CGACATGGAAGACCTACGGGAACGTGAGTTGGAATACGGTAAGGCTGGCTTCACTTTACA 36447
||| |||||||| || || || || | ||| || |||| ||||||| || ||||
Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473
Query 36448 GTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCCCTT 36492
||||||||| |||||||||||||| || |||||||||||| ||
Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121381780369080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |