Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 428 6e-115
seq388653 129 8e-25
seq231358 114 2e-20
seq103378 100 4e-16
seq28532 96.9 5e-15
>seq44246
Length=4029
Score = 428 bits (474), Expect = 6e-115
Identities = 1172/1780 (66%), Gaps = 14/1780 (1%)
Strand=Plus/Minus
Query 79042 AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTA 79101
|| ||||| || || || | || || ||||| |||| || | || ||||| || ||
Sbjct 1774 AGCAGATGGGGGTTGACGATCTGGAACTCTCCTGACAGGACCCGGCGGGTGTAGATGTTG 1715
Query 79102 CTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGC 79161
||||| || | || | || || || || |||| || || || || || ||||| |||
Sbjct 1714 CTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGC 1655
Query 79162 ATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAG-AGA 79220
|| || |||| || | || || || | |||| ||| || || || || ||
Sbjct 1654 ATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGC 1595
Query 79221 TTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCATATTGTAGAATACCGT 79279
|||| | ||||| || || | || | | | | ||| | || || || || || || |
Sbjct 1594 TTCC-AGTCCCACAGGTCGGTGGGCGTCTTC-TCCCACATGTCGTACTGGAGGATGCCCT 1537
Query 79280 TACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAAC 79339
| || || || ||| ||| || || || || || || |||| | ||| || |
Sbjct 1536 TGCTGACGGGGGAGCCTC-GTACGTGTCGTAGGGGCCCAGCTCGGCGGCCAGTTCGCAGC 1478
Query 79340 TCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTT 79399
| ||||| | || |||| || ||||| || || |||| | || || || || |
Sbjct 1477 TGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCT 1418
Query 79400 CTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAA 79459
| |||| ||||| || ||| | || || || ||||| || | || || || || |
Sbjct 1417 CGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGA 1358
Query 79460 TACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAA 79519
||||||| || || || | ||| || || || || || || | || || | ||||
Sbjct 1357 TACCGATCGGCCTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAA 1298
Query 79520 TATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 79579
| ||||| || || || || ||| | || || |||||| |||| || ||||| |
Sbjct 1297 TCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACAGACTCCAGTTTCTTGA 1238
Query 79580 AATCAAATCGTCCA-TCTA---TTACAAACATGTTCAACGCGACAGATGCCAGATTACAA 79635
| ||||| |||| || | || ||||||| | |||| || |||||||||||
Sbjct 1237 AGTCAAAA-GTCCGCTCGGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACAC 1179
Query 79636 ACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTA 79695
|| || ||||||| || | |||| | ||||| ||||||||||| || |||||
Sbjct 1178 ACAGCGACCTCATCGCCACTGGAGTATTCAACGATTTCCGTGCAGAGGTTGCTGCACTTG 1119
Query 79696 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAC 79755
|||||||| | || || || || ||||| |||| || || || || || || ||| ||
Sbjct 1118 ATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTAC 1059
Query 79756 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 79815
|| || || | || |||| || || || || || | ||| || ||||||| |
Sbjct 1058 GGCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGAGCCTTCACC 999
Query 79816 ATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCC 79875
| | |||| | || | || ||||| || || | || ||||| || |||
Sbjct 998 ACACGCTTGACCCGGCCCTCCCGCTCATATTGGGTGTAGAGCTTCTCAAACTCCTCCCCC 939
Query 79876 CAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCC 79935
|| ||||| | || || | ||| |||||||||| ||||| || | |
Sbjct 938 CAGCACTCGTCCAGCCCGGGGCTCTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCTC 879
Query 79936 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCT 79994
| || | ||||| || || || || ||||| | ||| || || |||||||||| |||
Sbjct 878 TCCACCCTCTTCATGAACAGGTCGGGGATCCACA-AGCCGTAGAAGAGATCTCTGGCTCT 820
Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054
|||||||| || || || ||||| || || || ||||| | | | ||| | |||||
Sbjct 819 CTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCA 760
Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114
||| |||| ||| ||||| | | || ||||| ||||| || ||||| || | || |
Sbjct 759 CGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACATAGCG 700
Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174
|| ||||| || || || |||| ||| || | | || ||||| | || ||||| ||
Sbjct 699 TGCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTTGGAGTTGCCGTTGGTGCC 640
Query 80175 GGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCAT 80234
|| ||| ||||| || ||| || || || | | | ||| ||||| ||||||
Sbjct 639 GGCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCACACCGATTCCTCCTGCCGA 580
Query 80235 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAAT 80294
|| ||||| | ||| || | || | ||| || ||||||||||| ||||| || || |
Sbjct 579 CTTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTT 520
Query 80295 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 80354
|||| | || || || ||||| || | || | || | ||||| || || || | ||
Sbjct 519 CATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGGTTCCTGCGTTGAAGAGCGT 460
Query 80355 AGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTC 80414
|| || ||||| || ||||| || || || || || ||||| ||||| || || | ||
Sbjct 459 GGGGGAGGCGTGGGTGAACCACTTCTCCGAGAGCAGGTTGTAGGTCTCGATGGCGGCGTC 400
Query 80415 TATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474
|||||| | || ||||| |||| || | ||| | ||||||||| || | || |
Sbjct 399 GATATCCGTCTTGTGGATTCCGACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCCGC 340
Query 80475 GATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 80534
| ||| || || |||| || ||| ||| |||| || || || || || ||||
Sbjct 339 CACTTTGCCGTTGATCTTCAGCAGGTAGGATCGCTCCAGCGTCTTGAAGCCGAAGAAGTT 280
Query 80535 GTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC 80594
||| || || |||| ||| | || || |||||||||| ||||| | | |||
Sbjct 279 GTAGGAGAAATCTCTGTCGAAGATGATGGCCGAGTTGAGGCGGTCCTTGTGGGCGAGAAC 220
Query 80595 TACATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 80653
| || | ||| | ||| || || || || || || | || ||| || | |
Sbjct 219 GATGTCGAGGGT-CTCCTTGGAGATCATGGGGGAGTGGCGTCTGTTCAGAGGGTTGATGT 161
Query 80654 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTG 80713
|| || | | ||||||||||| ||||| || | || || || |||||||| || || |
Sbjct 160 AGCTGTACAGGTCCTCCATCACCTCACTGAAAACCTTCTTCGTCTCCTTGTGCAGGTTGG 101
Query 80714 ATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTG 80773
| ||||| || | |||||| | ||||| || || || |||| || || ||||| |
Sbjct 100 AGACGGCGATCCGGGCGGCGAGGATGGCGTAGTCCGGGTGTTTGGTGGTGAGGGTGGCGG 41
Query 80774 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 80813
|| || || ||||| ||||||| || || || || ||
Sbjct 40 TGATCTCTGCAGCCAGGGTGTCCAGCTCCACGGTGGTGAC 1
>seq388653
Length=382
Score = 129 bits (142), Expect = 8e-25
Identities = 254/367 (69%), Gaps = 18/367 (5%)
Strand=Plus/Minus
Query 79631 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTT--ACT 79688
|||| || ||||| |||| || | | |||| || || || || || | ||| ||
Sbjct 382 TACACACTGCTACTTCATCAGGAGAGGTGTATTCCATGATCTCTGTACACAAGTTTGACG 323
Query 79689 ACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 79748
| || ||| ||||||||||| | ||| || || ||| |||||| ||||| |
Sbjct 322 A-ACG-AATAGTTCCTAAATTCTTTTGGTTTGATTTACGGTTTGCCGCATCTTTATATAA 265
Query 79749 AATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC-CAGACGACTC--G 79805
|| ||||||| ||||| || || |||||||||| ||| |||| | || | || |
Sbjct 264 CATATACGGAGTTCCAGTCTCGATTTGAGATTCTAGAAT---TTTCTCCCACAATTCATG 208
Query 79806 AGCCTTTATTATAGACTTGTATCTCTTTTCT--CTTTC--GTATTGTGTATATAATCGTT 79861
|| || ||| | || | | |||||| ||||| ||| | ||||||| ||
Sbjct 207 TGCTTTAATTGT----TTTTCTACCTTTTCCAGCTTTCTCGTAGCTTTCATATAATGCTT 152
Query 79862 CGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACC 79921
| ||||| || || ||||||||| |||||||||||||||| ||||||||| || | ||
Sbjct 151 CAAACTCTTCACCATAAACATCGTACAATCCAGGACATTCGTTAGGACACATTAAAGTCC 92
Query 79922 ACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 79981
| | ||| || || | ||| |||||||| || | ||||| | |||| | || | ||||
Sbjct 91 AGTTTCCGTCTTCTTGTACACGTTTCATGAATAAATCAGAAGTCCACATGGCAAAGAATA 32
Query 79982 GATCTCT 79988
||||||
Sbjct 31 AATCTCT 25
>seq231358
Length=2322
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||||||||| || || || || ||||| || || || |||||||| ||||| | ||| |
Sbjct 628 CCTCGTCTCTGCTGATGAGCTCATTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 687
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || |||| || || |||||||| ||||||||||| || || ||||| ||||
Sbjct 688 TCAGCCAGAAGATGGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCACGGCGGCGAAGG 747
Query 50102 CAACAAGTCTCTCTCC 50117
| || | || ||||||
Sbjct 748 CCACCACTCGCTCTCC 763
>seq103378
Length=1867
Score = 100 bits (110), Expect = 4e-16
Identities = 105/138 (76%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394
|| || ||||| || | ||||| || ||||| || ||||| ||||| ||||| | |||
Sbjct 579 GTGCCGGCATTGAACAGTGTAGGTGAGGCGTGGGTGAACCACTTTTCCGACAGCAAGTTG 520
Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454
||||||||||| |||| || || || | || ||||| || || || || | ||||| |
Sbjct 519 TACGTCTCAATGGCTGCATCGATGTCTCTTTTGTGAATCCCGACGGCCACTCTCATTAGC 460
Query 80455 ATGTGCTGAGGTCTTTCA 80472
|||||||| ||||| |||
Sbjct 459 ATGTGCTGGGGTCTCTCA 442
Score = 84.2 bits (92), Expect = 3e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||||||||| ||||| || || ||||| || || | || || ||||||| || |||
Sbjct 1332 ACTCGTTTCATGAAGAGGTCTGGGATCCACAGGGCGAAGAACAGGTCTCTGGCCCTCTGC 1273
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
||||| || ||||| ||||| || | || | |||| | | | || ||||||||||
Sbjct 1272 TCCTCTTTACCTGTGTTCTTCTTCATCTCTAAGAACTCAAACACGTCCAAATGCCACGGC 1213
Query 80059 TCCAAGTATATGGC 80072
|||| ||| | |||
Sbjct 1212 TCCAGGTACACGGC 1199
>seq28532
Length=8763
Score = 96.9 bits (106), Expect = 5e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| || || ||||| || || ||||| || || || |||||||||| ||| | ||| |
Sbjct 1945 CCTCATCCCTGCTAATCAGCTCATTGGAGAAGGTAAGCCCGGGCATTAAGCCTCTCTTCT 1886
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| |||||||| |||| || || || || || ||||||||||| || || || ||||| |
Sbjct 1885 TCAGCCAAAAGATGGCAGCGAACGAACCGGAGAAGAAGATTCCCTCCACGGCAGCAAAAG 1826
Query 50102 CAACAA 50107
| ||||
Sbjct 1825 CCACAA 1820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 713550653863280
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