Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq496362 228 8e-55 >seq496362 Length=882 Score = 228 bits (252), Expect = 8e-55 Identities = 528/786 (67%), Gaps = 31/786 (4%) Strand=Plus/Minus Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTAT--TGACATAAACACTTTATCACAAC 13686 ||||| || | |||||||| || ||||| ||| || || ||| || | |||| Sbjct 879 AGTGAAATCATGTCCATAAAGTCGAATGGGTTTGGCGTGTTGTATTCACGTT--CGCAAC 822 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 ||||||||| || | |||||| | | |||||| | |||||| | |||||||| || Sbjct 821 CTAGTTCTACTAAAAGTCTATCGGTTACAAACTCTAAATATTGCGTCATTAAATTCGCAT 762 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| |||| ||||||||| | | || | ||||||| |||| || | | Sbjct 761 TCATACCAATTAAACTTACAGGAAGTGATTCTGTAATAAATTCTCTTTCGATGTTTAAGG 702 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTA-----GATGTT- 13860 | || | ||||| || | || | || || | | | ||||| |||||| Sbjct 701 CGTCAATAATAATGGTTCTGATTCTGTCTTTTG--GCACTTTATTTACCAAGTGATGTTG 644 Query 13861 -TAAAAATTAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 13918 | |||| ||| || |||||||| |||| || || || | | ||| | |||||| Sbjct 643 GTGCAAATG---CACTGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTT 587 Query 13919 TGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGA 13978 ||| ||||| |||||||||||||| ||||||||||| ||||| || || | | ||| | Sbjct 586 TGAGAATGTCAATCCTGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGC 527 Query 13979 CCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGC 14038 || || ||||| ||||| || ||||| ||||| || || ||||| ||| | || || | Sbjct 526 ACCTGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAAGAATC 467 Query 14039 TTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGT 14098 | | ||||||| | ||||| || | ||| ||||| ||| | | Sbjct 466 TGAAT------CAATCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAAC 413 Query 14099 TTCAATAGCATTAAATAAATATTCCTTCTCT--TTAGTACTTGAAATGTATGTATCAATA 14156 ||| | || || ||||||| | |||||| || || || | | || || || || Sbjct 412 TTCTAATGCGTTGAATAAATCGGCTTTCTCTGCTTCGTCTTTTACA--TAAGTGTCGATT 355 Query 14157 AGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAAGCA 14215 | ||| |||| |||| ||| || |||||||| || || |||||||| |||| | Sbjct 354 AACAAGGAATACGTTTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAA 295 Query 14216 TCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTAT 14275 | | ||||| | |||| ||||| ||| |||| || | ||||||||| || || Sbjct 294 TTTCGCTTCAGCATATTGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAAT 235 Query 14276 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14335 || || ||| || |||||||| || |||| ||| ||||||||||| || || || || Sbjct 234 TCCGTCTGAAGCGGCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATT 175 Query 14336 GA---GTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | || ||||| ||| |||||| | || | ||| | ||| || | ||||| || Sbjct 174 CAACTTGTTATTCCAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAA 115 Query 14393 ACTAGC 14398 ||| || Sbjct 114 ACTCGC 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476576774706800