Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq231358 89.7 8e-13 seq150714 89.7 8e-13 >seq231358 Length=2322 Score = 89.7 bits (98), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 || ||||||| ||||||||||| ||||| |||||||| || || || || ||||||| Sbjct 756 GAGTGGTGGCCTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGGTCCTTCGCTGCCATCT 697 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521 | ||||| |||||| | || || |||||||| ||||| Sbjct 696 TCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGAC 660 >seq150714 Length=4870 Score = 89.7 bits (98), Expect = 8e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 70035 TGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCC 70094 ||||| ||||| ||||| |||||| |||||||||| ||||| || ||||||||||||| Sbjct 1626 TGGATAACCTCGGGTTCACGGACAGAGAAGAGGGCGACCTGGGACCCGTGTACGGATTCC 1685 Query 70095 AGTGGAGGCACT 70106 |||||||||||| Sbjct 1686 AGTGGAGGCACT 1697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 736191348853520