Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_004456.1
Length=43198
Score E
Sequences producing significant alignments: (Bits) Value
seq503395 241 4e-59
>seq503395
Length=393
Score = 241 bits (266), Expect = 4e-59
Identities = 290/394 (74%), Gaps = 1/394 (0%)
Strand=Plus/Minus
Query 27327 TGACGATCATTGCTACGGACGGCTATCGCAAAGCGGTCGAGCATAATWCAGGCGGTCGAA 27386
|||| || || || || |||||||| ||||| ||||||| ||| | |||||||| |
Sbjct 393 TGACCATTATCGCCACCGACGGCTACAAAAAAGCTATCGAGCACAATTCTGGCGGTCGCA 334
Query 27387 ACACAGTCATTTATGATGCCCAGGGCAACCCTAATATCATGTGCGTCATCCCGCGCTTCA 27446
| || || | ||||| || ||||| || ||||| || |||||||| |||||||||||||
Sbjct 333 ATACCGTGGTGTATGACGCTCAGGGTAATCCTAACATTATGTGCGTTATCCCGCGCTTCA 274
Query 27447 ACATTGAAGACCTGGGATTAACAGAGCTTGATCTTGGCACAGGTGTTCACCCTGCATTTG 27506
| ||||||||||| || | || | | ||||||||||| ||||||||||| ||
Sbjct 273 ATATTGAAGACCTAGGGCTGGTTGACTTAAACCTTGGCACAGGGGTTCACCCTGCGTTCC 214
Query 27507 TAACGAACGGAGCGCCTCGCGGCGAAATCCTTGTCGGCAAATATCTGGCGTCATCGGCGG 27566
||| ||||| | || ||||| || || | ||||||| ||| |||| ||| | | |
Sbjct 213 -AACTAACGGCGTACCCCGCGGTGAGATATTAATCGGCAAGTATTTGGCCTCAACAACTG 155
Query 27567 CGGGCGGCTCTGCCGTTATCGGTGGCCCTCAGCCGCGAACCTCAGTTAACTACGACACTG 27626
|| || || || || |||||| |||||||| ||||||| |||||| | |
Sbjct 154 CGAATGGTAGCGCAGTCATTGGTGGCGTCCAGCCGCGCGTATCAGTTAGCTACGATGCAG 95
Query 27627 CAAAACAGCTTTGCACGCAAAAGGGTGACAACTGGCACCTTATGTCGATTCACGAGTGGG 27686
||||| |||| ||||||| || || | || |||||| | ||||| | ||||||||||
Sbjct 94 CAAAAGAGCTGTGCACGCGCAAAGGCGCAAATTGGCACATGATGTCAGTGCACGAGTGGG 35
Query 27687 CCGCCATTGCACTCTGGTCTCTGGCTAATGGTAC 27720
|||| ||||| || ||||| || |||||||| ||
Sbjct 34 CCGCTATTGCGCTATGGTCCCTCGCTAATGGAAC 1
Lambda K H
0.635 0.409 0.914
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137250134679840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |