Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq519417 114 3e-21 >seq519417 Length=265 Score = 114 bits (126), Expect = 3e-21 Identities = 134/178 (75%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 379 CGAA-TGGCCTAAGGTCTGGCGTCAGTATCTTACCGGTTTCGAGCTGGCCGACATGTTCG 437 |||| |||||||| || ||||| ||||| || ||||| |||| | || || |||| || Sbjct 3 CGAAGTGGCCTAAAGTGTGGCGACAGTACCTATCCGGTGTCGACTTAGCAGAAATGTACG 62 Query 438 AAGGCCG--CGGCGACGAGAAAGAACTTGTTGGCATACTCaaaaaaaTAAAATGGCCTGA 495 | | || |||| | || |||| | | | ||||| | || ||||| || |||||||| Sbjct 63 A--GTCGAACGGCAATGAAAAAGTATTGGCCGGCATCATTAAGAAAATCAAGTGGCCTGA 120 Query 496 CAAGGTGAAGAACCTCGAGCTTATTGGTAAGCACGTCGACGTCAACGCGTTCAAAGAA 553 |||||| |||||||| ||| | |||||||||| | | ||| ||||| ||||||||| Sbjct 121 CAAGGTTAAGAACCTAGAGTTACTTGGTAAGCATGCCAGCGTTAACGCATTCAAAGAA 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126034165610892