Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_004777.1
Length=37555
Score E
Sequences producing significant alignments: (Bits) Value
seq515320 100 7e-17
seq512931 98.7 2e-16
>seq515320
Length=237
Score = 100 bits (110), Expect = 7e-17
Identities = 128/175 (73%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 11113 CTACGTGGTTCTGGCGCATTACGCCAACTATCTGATACTATTATTGCCCTTGAGCGTAAT 11172
|| |||||||| || || | ||||| || |||||| |||| ||| ||||| | |||
Sbjct 16 CTTCGTGGTTCAGGTTCAATTGCTCAACTCTCAGATACTGTTATAGCCTTTGAGAGGAAT 75
Query 11173 CAGCAAGGCGATATGCCTAACCTTGTCCTCGTTCGTATTCTCAAGTGCCGCTTTACTGGT 11232
|||||||| | |||||| ||| | | | || | ||||| |||||||| |||
Sbjct 76 CAGCAAGGGAGCAGTCCTAACAAGGTCTTGATAAGAATCTTAAAGTGTCGCTTTACAGGT 135
Query 11233 TATA-CTGGTATCGCTGGCTACATGGAATACAACAAGGAAACAGGATGGCTTGAA 11286
| | ||||||| || |||||| || | ||||| ||||||| ||||||||||||
Sbjct 136 GAAAACTGGTATAGCAGGCTACTTGAATTACAATCAGGAAACTGGATGGCTTGAA 190
>seq512931
Length=538
Score = 98.7 bits (108), Expect = 2e-16
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 35777 CCAACAGACCCCGTGCGCTTCGACCGTGATGACCTACGTGAGCGTGAGTTGGAATACGGT 35836
|| |||||||| | || ||||| ||| ||||| |||||||| || | ||| ||
Sbjct 394 CCTACAGACCCTATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGC 453
Query 35837 AAGGCTGGCTTTACGTTACAGTTCATGCTTAACCCGAACCTGAGTGATGCCGAGAAGTAC 35896
|||| |||||| | ||||||||||||| ||||||||||| || || ||||||||||
Sbjct 454 AAGGGTGGCTTCGCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTAC 513
Query 35897 CCTCTGAGGCTCCGTGA 35913
|| ||| ||| |||||
Sbjct 514 CCGTTGAAGCTGCGTGA 530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119305220175708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |