Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_004831.2 Length=43769 Score E Sequences producing significant alignments: (Bits) Value seq494738 156 1e-33 seq502596 91.5 4e-14 >seq494738 Length=508 Score = 156 bits (172), Expect = 1e-33 Identities = 211/290 (73%), Gaps = 12/290 (4%) Strand=Plus/Plus Query 36323 TTGCGTGGTAGC-GACAAGTCTCCATCAGTGGCTTGCTACTCCATCGAAGCAGGTATGCA 36381 || ||||| ||| |||||||||||||| || |||| ||||| ||||| |||| || Sbjct 82 TTCCGTGG-AGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACA 140 Query 36382 GGGTGCGCGTGCAGATATCATCTTGGCGGATGACGTAGAGTCGTTGCAGAACTCTCGTAC 36441 ||| || ||||| ||||| || | || ||||| | ||||| || |||||||||||| | Sbjct 141 GGGCGCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTC 200 Query 36442 TGCCGCAGGTCGTG---CTTTACTTGA--AGACCTTACCAAGGAGTTTGAATCGATCAAC 36496 | || || |||| || | || |||||||| ||||| || || |||||| Sbjct 201 AGTTGCTGGCCGTGAATGGTTGATGGAGCAGACCTTA-----GAGTTCGAGTCTATCAAC 255 Query 36497 CAGTTTGGTGATATCATCTACTTGGGTACTCCTCAAAGCGTAAACTCCATCTACAACAAC 36556 || |||||| |||| || ||||| || || || || ||||| | || ||||||||| Sbjct 256 CAATTTGGTCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGG 315 Query 36557 CTCCCTGCGCGTGGGTATCAGATTCGCATCTGGCCAGGTCGCTACCCTAC 36606 || ||| ||||| || || |||| |||||| ||||| | |||||||| Sbjct 316 CTGCCTAGTCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCTAC 365 >seq502596 Length=783 Score = 91.5 bits (100), Expect = 4e-14 Identities = 97/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 18661 TACGACTTAACGTGTATTGGTTGGGAAGAGGGGAAAGGTAAATACAAAGGTAAAGTAGCT 18720 || |||||| |||||||| | || || || | ||||| || ||||| || |||||| Sbjct 345 TATGACTTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCT 404 Query 18721 AATCTTATATTTAAATGGAAGGGTGGCAAGACAATCAAGGCTATGCTTGGCCGTGGCTGG 18780 ||||| | ||||| ||||| ||| ||| || ||||| |||||||||||| | || ||| Sbjct 405 AATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGGCAG-GGTTGG 463 Query 18781 ACACATG 18787 || |||| Sbjct 464 ACTCATG 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139065932337444