Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_004831.2
Length=43769
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 156 1e-33
seq502596 91.5 4e-14
>seq494738
Length=508
Score = 156 bits (172), Expect = 1e-33
Identities = 211/290 (73%), Gaps = 12/290 (4%)
Strand=Plus/Plus
Query 36323 TTGCGTGGTAGC-GACAAGTCTCCATCAGTGGCTTGCTACTCCATCGAAGCAGGTATGCA 36381
|| ||||| ||| |||||||||||||| || |||| ||||| ||||| |||| ||
Sbjct 82 TTCCGTGG-AGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACA 140
Query 36382 GGGTGCGCGTGCAGATATCATCTTGGCGGATGACGTAGAGTCGTTGCAGAACTCTCGTAC 36441
||| || ||||| ||||| || | || ||||| | ||||| || |||||||||||| |
Sbjct 141 GGGCGCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTC 200
Query 36442 TGCCGCAGGTCGTG---CTTTACTTGA--AGACCTTACCAAGGAGTTTGAATCGATCAAC 36496
| || || |||| || | || |||||||| ||||| || || ||||||
Sbjct 201 AGTTGCTGGCCGTGAATGGTTGATGGAGCAGACCTTA-----GAGTTCGAGTCTATCAAC 255
Query 36497 CAGTTTGGTGATATCATCTACTTGGGTACTCCTCAAAGCGTAAACTCCATCTACAACAAC 36556
|| |||||| |||| || ||||| || || || || ||||| | || |||||||||
Sbjct 256 CAATTTGGTCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGG 315
Query 36557 CTCCCTGCGCGTGGGTATCAGATTCGCATCTGGCCAGGTCGCTACCCTAC 36606
|| ||| ||||| || || |||| |||||| ||||| | ||||||||
Sbjct 316 CTGCCTAGTCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCTAC 365
>seq502596
Length=783
Score = 91.5 bits (100), Expect = 4e-14
Identities = 97/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 18661 TACGACTTAACGTGTATTGGTTGGGAAGAGGGGAAAGGTAAATACAAAGGTAAAGTAGCT 18720
|| |||||| |||||||| | || || || | ||||| || ||||| || ||||||
Sbjct 345 TATGACTTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCT 404
Query 18721 AATCTTATATTTAAATGGAAGGGTGGCAAGACAATCAAGGCTATGCTTGGCCGTGGCTGG 18780
||||| | ||||| ||||| ||| ||| || ||||| |||||||||||| | || |||
Sbjct 405 AATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGGCAG-GGTTGG 463
Query 18781 ACACATG 18787
|| ||||
Sbjct 464 ACTCATG 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139065932337444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |