Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_004928.1
Length=167560
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 197 1e-45
seq509673 136 4e-27
seq506238 127 2e-24
seq351952 102 9e-17
>seq449735
Length=3187
Score = 197 bits (218), Expect = 1e-45
Identities = 486/734 (66%), Gaps = 5/734 (1%)
Strand=Plus/Minus
Query 141859 TTAGTTGGAATAGCGATTTCACAACATAAGTTACTCTGACGAATTGGAGCTTTTTCACGA 141918
|||||||| | || ||||| ||||||| ||| || ||||| || || || | |
Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696
Query 141919 ATAAACGGAGTGTAGTTATTCGTGTTATCAACAAACTGTGGATAAATTCGAGCAGTACCA 141978
|| ||||| ||| |||| || ||||| ||| ||||| ||| | ||||
Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636
Query 141979 GAACGTTCAGTCATGAACAATTCAAAGAGTTCTAGTGCTTTGATTCTTTTCTTTCTGATT 142038
| |||||| | |||| | || ||||| | ||||| || | ||| || | |||
Sbjct 635 GCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATT 576
Query 142039 GTTGGGTCTTTTTCAGCTTTCTCATAAAGCTCACGGAATTTATCTTGATCTTCAAAGAAT 142098
| | ||||| ||| ||| |||||||| | || | ||||| |||||||| |||
Sbjct 575 GATTCGTCTTGTTCGTATTTTACATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAAT 516
Query 142099 GAGTAATATAGTTCGCCTGACATTTCGTGAGGGCTAAATAAAGTAATATAATCATTTTTA 142158
| | || || ||||| || || |||||||| || ||||| || || | ||||
Sbjct 515 GCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTA 459
Query 142159 CCAAGGCGTTCCATCATGAGGTCATTAATCTGAATTCCGTAGTCCATATGTCGAATACGG 142218
| || ||| || | ||||| ||| | ||||| || | ||| || | |||
Sbjct 458 ATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGG 399
Query 142219 TTTTCATCCACGCCTTTGTTATTTTTCAGAACTAATAGGTTCTCTACTTCTAAGTGCCAC 142278
|| ||||| || || ||||||||| || ||||| ||||| ||||||||||| |||||
Sbjct 398 TTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAA 339
Query 142279 ATTGGATAATACGCTGTAGCAGCACCACCACGAATACCACCTTGAGAACAAGATTTTACT 142338
| || || || || || || || ||||| | ||| ||||| ||||| ||| ||
Sbjct 338 AGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACC 279
Query 142339 GCAGTTTGGAAATGTTTCCAGAATGGAATAACACCCGTATGTCGAACTTCACCCATACCG 142398
|| ||||| || || || | || |||||| ||||||||| |||| || | |
Sbjct 278 GCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTGCGA 219
Query 142399 ATCTTAGAACCTTCTGCACGAAGCATACCAACGTTGATACCGATACCAGCTCGTTTAGAA 142458
|| | ||| |||||||| ||| |||| || || || || || |||| ||
Sbjct 218 ATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGAT 159
Query 142459 ATATATTCAATAATTGATGCTGAAGTTTTGTTAATAGATTTTAACGAATCACCGGCTTCA 142518
| |||| || ||||| | || || |||||| || | | || || ||
Sbjct 158 ACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCT 99
Query 142519 ATAACTACACAACTAG-AGAACTGGCGAGTTGGAGTACGAGCACCTGCCATAATTGGGGT 142577
|| | ||||| || || |||||||| ||||| |||||| |||||||||||||||| ||
Sbjct 98 ATTAATACAC-ACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGT 40
Query 142578 TGGCAATGAAACTT 142591
|| | ||||| ||
Sbjct 39 AGGTAGTGAAATTT 26
>seq509673
Length=441
Score = 136 bits (150), Expect = 4e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142182 ATTAATCTGAATTCCGTAGTCCATATGTCGAATACGGTTTTCATCCACGCCTTTGTTATT 142241
||| | ||| | ||||| |||||||| || | |||||| || |||||||| ||||||
Sbjct 221 ATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATT 280
Query 142242 TTTCAGAACTAATAGGTTCTCTACTTCTAAGTGCCACATTGGATAATACGCTGTAGCAGC 142301
|||||| || |||| ||| |||||||| ||||| | ||| ||| || || || ||
Sbjct 281 TTTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGC 340
Query 142302 ACCACCACGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAA 142361
||| ||||| | || ||||| || || |||| || ||||||||||| |||| ||||
Sbjct 341 ACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAA 400
Query 142362 TGGAATAACACCCGTATG 142379
||| ||| |||||||||
Sbjct 401 TGGGATACAACCCGTATG 418
>seq506238
Length=275
Score = 127 bits (140), Expect = 2e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62073 TCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGA 62132
|| ||||| ||||| | | ||||| |||| ||||| || || | |||||||| ||
Sbjct 49 TCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGC 108
Query 62133 ACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCA 62192
||||| ||||| |||||||| || || | || ||||||||||| || || ||||| |||
Sbjct 109 ACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCA 168
Query 62193 TCTTCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTTGACCACCTTC 62245
||||||| ||||| ||||| | | || ||||| | ||||||||||||||
Sbjct 169 TCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq351952
Length=416
Score = 102 bits (112), Expect = 9e-17
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 62063 TTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 62122
|||||| || | ||||||||||| | ||| || || ||| ||||| | ||| | ||
Sbjct 21 TTATAGCGTCGCTGTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGA 80
Query 62123 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 62182
|||||| || ||||| ||||| |||||||| || || | || ||||| || || ||||
Sbjct 81 GTTAAATCGTACTGCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATT 140
Query 62183 CTTAACTGCATCTTCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTTGACCACC 62242
| | |||||| | |||| || || | |||||||| | ||||||||||||
Sbjct 141 TTCCATTGCATCCAATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACC 200
Query 62243 TTCAAT 62248
||||||
Sbjct 201 TTCAAT 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532542716198400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |