Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq152719 86.0 4e-12 >seq152719 Length=2073 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCG-ACTCTTTTTGTATATTGTAATCAG 33200 ||| ||||| | |||||| |||| ||| |||| | ||||||| || || ||||| || | Sbjct 271 ACCTCCTCTCAGCCGCAAGACCAGATG-AATGCAGGACTCTTTCTGGATGTTGTAGTCGG 329 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 | | | || | ||| |||| ||||| || ||| || | | |||||||| | | Sbjct 330 AGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAG 389 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | |||||||| || || ||| ||| || | | ||| ||||||||||||| || Sbjct 390 GGATGCCTTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGTTGGGTTCAA 449 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | ||||||| || || || || || || || || || || || || || Sbjct 450 CCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 316735971128796