Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq496362 179 3e-40
>seq496362
Length=882
Score = 179 bits (198), Expect = 3e-40
Identities = 520/781 (67%), Gaps = 37/781 (5%)
Strand=Plus/Minus
Query 12911 GAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTT---TTTACACCCT 12967
||||| | |||||||| ||||| || ||| || | ||||| || || |||
Sbjct 876 GAAATCATGTCCATAAAGTCGAATGGGTTTGGCGTG---TTGTATTCACGTTCGCAACCT 820
Query 12968 AATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAAT-CACAGTT 13026
| ||||| ||| | ||| || | |||||||||| || || ||||||||| | || ||
Sbjct 819 AGTTCTACTAAAAGTCTATCGGTTACAAACTCTAAATATTGCGTCATTAAATTCGCA-TT 761
Query 13027 CATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGC 13086
||| || ||||| ||||||| | | |||||| | ||| | | |||| || | | ||
Sbjct 760 CATACCAATTAAACTTACAGGAAGTGATTCTGTAATAAATTCTCTTTCGATGTTTAAGGC 701
Query 13087 TTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATA------GATGCTT 13140
|| |||| ||| ||| ||| || || ||| || || |||| |
Sbjct 700 GTCAATAATAATGGTTCTGATTCTGT---CTTTTGGCACTTTATTTACCAAGTGATGTTG 644
Query 13141 AAACATCATACA-TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199
|| || || ||| ||||||||||| | ||||| || | | || | |||||||
Sbjct 643 GTGCAA-ATGCACTGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTG 585
Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAAC 13259
| ||||| | || ||||| | ||||||||||| | ||| || || | | ||| | ||
Sbjct 584 AGAATGTCAATCCTGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCAC 525
Query 13260 CCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTAT 13319
| || || || |||||||| ||||||||||| || ||||| || | | || | |
Sbjct 524 CTGAGAAGAAAATTCCTTCCACTGCTGCAAAAGCAATCAA----TCGCTCTGCGAAAGAA 469
Query 13320 TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTT-TTGTTTAACGCAGTTCATATTT 13378
| | | || ||||| | | ||||||| ||||| || || | |||| | | |
Sbjct 468 TCTGA--ATCAATCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAG-GAAAAACT 412
Query 13379 TCTATTGCGTTAAATAAAT--AAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436
|||| |||||| ||||||| ||| | | ||| |||| | |||||| || || |
Sbjct 411 TCTAATGCGTTGAATAAATCGGCTTTCTCTGCTT--CGTCTTTTACATAAGTGTCGATTA 354
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATA-AAAACAT 13495
| ||| |||| |||| ||||||||||||||| |||||||||||||| ||| ||
Sbjct 353 ACAAGGAATACGTTTCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAAT 294
Query 13496 CTAGCCTCTG-ATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTAT 13554
| || || | ||| || ||||| ||| |||| || | ||||| || || ||
Sbjct 293 TTCGCTTCAGCATA-TTGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAAT 235
Query 13555 CCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGA 13614
||||| ||| || ||||| || | ||||| || ||||| | || ||||| ||
Sbjct 234 TCCGTCTGAAGCGGCGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCTTTATT 175
Query 13615 CAACT--TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671
||||| ||| ||| || ||||||| ||| ||||| | || || | ||||| ||
Sbjct 174 CAACTTGTTATTCCAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAA 115
Query 13672 A 13672
|
Sbjct 114 A 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428222149245804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |