Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq520772 114 3e-21 >seq520772 Length=281 Score = 114 bits (126), Expect = 3e-21 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 21841 CAAAGGATTCAATGTAACAGCCTGCTCAAGATGATCTGGTGCAAAGTGCGAATACTTCAT 21900 ||| |||||| | |||| || | || | ||| ||||||||||| || ||||| ||||| Sbjct 197 CAACGGATTCTACCTAACCGCATCTTCTAAATGCTCTGGTGCAAAATGTGAATATTTCAT 138 Query 21901 TGTTTCACGAATATTAGCGTGACCAAGTATCTTCTGAAGAACAAGGATGTTACCGCCGTT 21960 || ||| ||| |||||||||||||| ||| || || || || |||||||| || Sbjct 137 CGTATCAACAATTGATGCGTGACCAAGTATTCGCTGTAGCACCAGAATATTACCGCCATT 78 Query 21961 CATCATAAAATGCGCACCAAAGGTGTGACGTAAAACATGGGTTTTCTGGCCTT 22013 ||||||||||| | |||| ||||| ||||| |||||| | | || |||| Sbjct 77 CATCATAAAATAACTAGCAAATGTGTGTCGTAACACATGGCTCATTTGCCCTT 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97302586212552