Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq150714 140 2e-28 >seq150714 Length=4870 Score = 140 bits (154), Expect = 2e-28 Identities = 136/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 25766 CTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTC 25825 |||| ||||| || ||| ||||| ||||| | |||||||||||| |||||||| |||| Sbjct 1727 CTGCGTTCATGGTCGAGTATTCTGCACCGAAGTGCCTCCACTGGAATCCGTACACGGGTC 1668 Query 25826 CTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCAT 25885 | ||||| || ||||| |||| | || || ||||||| || | || || || | Sbjct 1667 CCAGGTCGCCCTCTTCTCTGTCCGTGAACCCGAGGTTATCCAGGAACTGTCGAGACCCGT 1608 Query 25886 TGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||| ||||||||||| ||||| ||||| |||||||| |||| |||||| ||||| Sbjct 1607 TGGCTTCCCAGATCTTCACCCCTTTCTCCGAGAGCTCCTTGGCGTTTGTTGACCC 1553 Score = 114 bits (126), Expect = 9e-21 Identities = 122/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||| || || || || || | ||||| Sbjct 2304 GCGATCATGTAGGTGAGAAGTGCGTAGCTGGCGATATTGAAAGGCACGCCCAGACCCATA 2245 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 |||||| || | |||||| ||||||||||| ||||| | |||| |||||| ||||| || Sbjct 2244 TCCCCC-GAGCGCTGGTACAGCTGACACGACAGCTCGCCATCGCACACGTAGAACTGGCA 2186 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 | || || ||| || || ||||| || ||| || |||| Sbjct 2185 GAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCT 2146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337959169820646