Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_006356.2
Length=36012
Score E
Sequences producing significant alignments: (Bits) Value
seq523893 138 3e-28
>seq523893
Length=315
Score = 138 bits (152), Expect = 3e-28
Identities = 200/280 (71%), Gaps = 2/280 (1%)
Strand=Plus/Minus
Query 21877 TTTTAGGGGTAAATACACAGCATTAGACATTATTTATAACTGCTTAAAAAGAAGCGGTAT 21936
|||||||| |||| | ||| || ||||||||| | || |||||||||| || ||
Sbjct 285 TTTTAGGGATAAAATAAAAGCCAGTGATATTATTTATTATTGTTTAAAAAGAACGGGGAT 226
Query 21937 ATTACTAAATATAAATACTTCTATAAATATTTTATATGATGGTTTAGCTGCTGAGAACAA 21996
||| ||| |||||| || |||||||| || || |||||||| ||| || | ||||
Sbjct 225 ATTGCTACCTATAAACACGTCTATAAACATCTTGTATGATGGGTTAACTTATACCGACAA 166
Query 21997 TACAGATATTTTAGATAAAATATATTTAAGTACAGAGCGTTATTTTAAAGTAGATGGTAA 22056
|||||||||| ||||||| | | | | || |||| |||||| || || |
Sbjct 165 CTTAGATATTTTAACTAAAATAAAGCTGAACGCTGATCGTTTCTTTAAAAATGACGGACA 106
Query 22057 AACTCAGGGAACAGGGACTATTACT-TCTTGTGAGGATGTTTTAAAATCTATTTTAGATG 22115
| || | | | | ||| |||| | ||||| || ||||||||||| ||| |||||||
Sbjct 105 ATCT-ACAGTAGATGGAACATTAATGTCTTGCGAAGATGTTTTAAAGTCTGTTTTAGAGA 47
Query 22116 TTTTTTGCGCTGTTATTACTCAGAAAGATGGTGAATGGTA 22155
| |||| ||| ||| |||||| || | |||||||||||
Sbjct 46 TATTTTCGGCTTGTATAACTCAGGAAAACGGTGAATGGTA 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 114398432459976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |