Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_006356.2 Length=36012 Score E Sequences producing significant alignments: (Bits) Value seq523893 138 3e-28 >seq523893 Length=315 Score = 138 bits (152), Expect = 3e-28 Identities = 200/280 (71%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 21877 TTTTAGGGGTAAATACACAGCATTAGACATTATTTATAACTGCTTAAAAAGAAGCGGTAT 21936 |||||||| |||| | ||| || ||||||||| | || |||||||||| || || Sbjct 285 TTTTAGGGATAAAATAAAAGCCAGTGATATTATTTATTATTGTTTAAAAAGAACGGGGAT 226 Query 21937 ATTACTAAATATAAATACTTCTATAAATATTTTATATGATGGTTTAGCTGCTGAGAACAA 21996 ||| ||| |||||| || |||||||| || || |||||||| ||| || | |||| Sbjct 225 ATTGCTACCTATAAACACGTCTATAAACATCTTGTATGATGGGTTAACTTATACCGACAA 166 Query 21997 TACAGATATTTTAGATAAAATATATTTAAGTACAGAGCGTTATTTTAAAGTAGATGGTAA 22056 |||||||||| ||||||| | | | | || |||| |||||| || || | Sbjct 165 CTTAGATATTTTAACTAAAATAAAGCTGAACGCTGATCGTTTCTTTAAAAATGACGGACA 106 Query 22057 AACTCAGGGAACAGGGACTATTACT-TCTTGTGAGGATGTTTTAAAATCTATTTTAGATG 22115 | || | | | | ||| |||| | ||||| || ||||||||||| ||| ||||||| Sbjct 105 ATCT-ACAGTAGATGGAACATTAATGTCTTGCGAAGATGTTTTAAAGTCTGTTTTAGAGA 47 Query 22116 TTTTTTGCGCTGTTATTACTCAGAAAGATGGTGAATGGTA 22155 | |||| ||| ||| |||||| || | ||||||||||| Sbjct 46 TATTTTCGGCTTGTATAACTCAGGAAAACGGTGAATGGTA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114398432459976