Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq523693 93.3 2e-14 >seq523693 Length=695 Score = 93.3 bits (102), Expect = 2e-14 Identities = 220/332 (66%), Gaps = 3/332 (1%) Strand=Plus/Minus Query 11168 CCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTCCTGG 11227 || |||| |||||| |||| | ||||| || | || || |||| | ||| ||| Sbjct 402 CCTAGCATCTGCATGCTGCCACTCTGATCGACGACAATTTCAGTTGTGTACTTGTCTTGG 343 Query 11228 CCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGAGCCC 11287 ||| ||| | | |||||| || || | | | ||||| | ||| || || || || Sbjct 342 CCGCTTTGGTCTTTCCACTTACGTGTCTGCAATTTACCTTCAAGGTAAACTTGCGAACCT 283 Query 11288 TTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTGCCAC 11347 || |||||||| | || | |||||| || | | ||| || | ||| || ||||||||| Sbjct 282 TTACGCAGGTACTCAGCCGTGATTTCAGCTAACTTGCCGAACATCACCACGCGGTGCCAC 223 Query 11348 TCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGCCAGA 11407 ||||| || || || || || || ||| | ||||||||| |||||| || || || Sbjct 222 TCGGTACGTTCTTGTTGTTGACC---CTGTTGGTCTTTCCAAGATTCGCTGGTAGCAAGG 166 Query 11408 CTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCCCAGA 11467 | | || || || || || || || | | | || ||||| ||||| | | Sbjct 165 GTAATATTGGCCACGGCATTGCCATTTGGCATATAACGCACTTCGGGATCTTGGCCTAAA 106 Query 11468 TGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499 | |||||| | || || ||||| || || || Sbjct 105 TTGCCGACTAATATGACTTTGTTAACACCACG 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 207163855275832