Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq523693 93.3 2e-14
>seq523693
Length=695
Score = 93.3 bits (102), Expect = 2e-14
Identities = 220/332 (66%), Gaps = 3/332 (1%)
Strand=Plus/Minus
Query 11168 CCGAGCAGTTGCATGTTGCCGTTGATGTCGACCACTACCTCGGTGCTGTAGTGGTCCTGG 11227
|| |||| |||||| |||| | ||||| || | || || |||| | ||| |||
Sbjct 402 CCTAGCATCTGCATGCTGCCACTCTGATCGACGACAATTTCAGTTGTGTACTTGTCTTGG 343
Query 11228 CCGTCCTGGCCCTGCCACTTGCGGGTGCGTAGGCTGCCTTCGATGTAGACCTGGGAGCCC 11287
||| ||| | | |||||| || || | | | ||||| | ||| || || || ||
Sbjct 342 CCGCTTTGGTCTTTCCACTTACGTGTCTGCAATTTACCTTCAAGGTAAACTTGCGAACCT 283
Query 11288 TTTCGCAGGTATTGCGCTGCGATTTCGGCCAGCCGGCCAAAGAGCACGACCCGGTGCCAC 11347
|| |||||||| | || | |||||| || | | ||| || | ||| || |||||||||
Sbjct 282 TTACGCAGGTACTCAGCCGTGATTTCAGCTAACTTGCCGAACATCACCACGCGGTGCCAC 223
Query 11348 TCGGTGCGCTCCTGCTGCTGGCCGGTCTGCTTGTCTTTCCAGCTTTCGCTAGTGGCCAGA 11407
||||| || || || || || || ||| | ||||||||| |||||| || || ||
Sbjct 222 TCGGTACGTTCTTGTTGTTGACC---CTGTTGGTCTTTCCAAGATTCGCTGGTAGCAAGG 166
Query 11408 CTGAGGGAGGTGACCGCCTTTCCGCCCGGGGTAGATCTTGCGTCTGGATCCTGGCCCAGA 11467
| | || || || || || || || | | | || ||||| ||||| | |
Sbjct 165 GTAATATTGGCCACGGCATTGCCATTTGGCATATAACGCACTTCGGGATCTTGGCCTAAA 106
Query 11468 TGGCCGACCAGGATTACCTTGTTCACTCCGCG 11499
| |||||| | || || ||||| || || ||
Sbjct 105 TTGCCGACTAATATGACTTTGTTAACACCACG 74
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 207163855275832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |