Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq509954 163 4e-35 seq449735 87.8 2e-12 seq326422 87.8 2e-12 seq258675 86.0 8e-12 >seq509954 Length=433 Score = 163 bits (180), Expect = 4e-35 Identities = 214/293 (73%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 80254 CATGGTCTTGATGCTGAGCAAGAGCTTGCTAACATTCTTTCGAGTGAAGTTCTTGCTGAG 80313 ||||| | || || || |||| ||||| || |||||||| | |||| ||||||| || Sbjct 24 CATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAA 83 Query 80314 ATCAACCGCGAAGTTGTACGTAGAGTGTACACAGTTGCCAAGAAAGGTGCTCAGAACAAC 80373 || ||||| || | | |||| || || || ||| || ||||| || ||| Sbjct 84 ATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACA-AACTG- 141 Query 80374 GTT--GCTAACGCTGGCATCTTCGACCTTGATGTTGATTCAAATGGTCGTTGGTCTGTTG 80431 ||| || |||||||| |||||||| | || || ||| |||||||||| ||||| || | Sbjct 142 GTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAG 201 Query 80432 AAAAGTTCAAGGGTCTTCTATTCCAAGTTGAGCGTGATGCTAACGCAATCGCACAAGAGA 80491 |||| ||||| || ||| | |||||| |||| |||||||||||| |||||| |||| | Sbjct 202 AAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAA 261 Query 80492 CTCGTAGAGGCAAGGGTAACTTCCTAATCTGCTCTGCTGACGTTGCTTCAGCA 80544 | | | || || |||||||| | ||||| || ||||||| ||||| ||| Sbjct 262 CCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGCA 314 >seq449735 Length=3187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 114515 ATATTCTAGAAGGTATTCGTTTTTATGTATCATTTGCATGTTCATTTGCATTTGGTGAGA 114574 ||||| |||||| |||||||||||||| ||||| || || ||||| |||| |||| Sbjct 2370 ATATTTTAGAAGCGATTCGTTTTTATGTCAGCTTTGCCTGCTCGTTTGCGTTTGCTGAGC 2429 Query 114575 ATAAATTGATGGAAGGTAATGCGAAAATTATTTCTCTCATTGCAAGAGATGAA 114627 | |||||||||||||||| || ||||| || || ||||| | |||||| Sbjct 2430 GTGAATTGATGGAAGGTAACGCTAAAATAATCAAGCTTATTGCCCGCGATGAA 2482 >seq326422 Length=2068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 118756 AACTATTCTGGGAGGATTTCCGAGTGGTTAAAGGAATCTGACTGTAAATCAGACGGCTCT 118815 || ||| ||| || || ||||| || ||||| ||| ||||||||||| |||||||| Sbjct 543 AATTATCGTGGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCA 484 Query 118816 GCCTTCGCAGGTTCGAATCCTGCTCCTCCCACC 118848 |||||||| ||||||||||| ||||| ||||| Sbjct 483 GCCTTCGCTGGTTCGAATCCAGCTCCCTCCACC 451 >seq258675 Length=1951 Score = 86.0 bits (94), Expect = 8e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 143 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA 202 Query 164884 TCCCACTCCCGCTCCCATTT 164903 ||| ||||||| ||| || Sbjct 203 TCCGGCTCCCGCAACCAATT 222 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 164824 CGCGGGATGGAACAGTCTGGTAGTTCAGCGGTCTCATAAGCCGCAGGTCGTGGGTTCAAA 164883 ||||||||||| ||||||||||| || ||| ||||||| ||| ||||||| |||||||| Sbjct 393 CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA 452 Query 164884 TCCCACTCCCGC 164895 ||| ||||||| Sbjct 453 TCCGGCTCCCGC 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623843019500800