Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 181 2e-40
seq156338 86.0 1e-11
>seq509954
Length=433
Score = 181 bits (200), Expect = 2e-40
Identities = 288/408 (71%), Gaps = 9/408 (2%)
Strand=Plus/Plus
Query 119923 TTGCTCAAGACCTCAAGGCAATCCACGGTTTGAATGCAGAAGCAGAACTTGCTAACATTC 119982
||||||| || | || || | || || ||| | ||||||| ||||||||| || ||||
Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60
Query 119983 TTTCTACTGAGATCCTTGCGGAAATCAACAGAGAAGTTATCAGAAC--TATCTACAACGT 120040
|||| ||||| || ||||| ||||| ||| | || | || | || ||| | ||||
Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACT- 119
Query 120041 AGCAGAGCCTGGTGCTCAAGCAAACGTT--GCTGCTGCTGGAACATTCGACCTTGACACC 120098
||| | |||||||| ||| | ||| || ||||| | ||||| | |||
Sbjct 120 -GCAAAACCTGGTGCACAAACTG--GTTCAGCAAACGCTGGTATCTTCGATTTAGACGTA 176
Query 120099 GATTCAAACGGTAGATGGTCAGTTGAGAAGTTCAAAGGACTTATCTTCCAGATCGAGCGT 120158
||| |||| ||| | |||||||| || || |||||||||||||| ||||| || || |||
Sbjct 177 GATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGT 236
Query 120159 GATGCCAACGCTATCGCACAAAGAACTCGTCGTGGAAAGGGTAACATGATCCTTTGTTCC 120218
||||| ||| ||||| || ||| | ||||| || |||||| | || | |||||
Sbjct 237 GATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCA 296
Query 120219 GCAGACGTTGCTTCTGCTCTAACAATGGCTGGTGTTCTCGATTACACTCCTGCACTTAAC 120278
| ||||| |||||||| | | ||||| | || |||| | | ||||| |
Sbjct 297 TCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAATCCTTGATTTCGCACCTGCTATCTCT 356
Query 120279 GCTAACCT-TAATGTAGATGATACAGGCAATACATTTGCTGGTATTCT 120325
|| || || || ||||||||||| || ||||||||||||||| ||||
Sbjct 357 GCAAATCTACAAAGTAGATGATACCGGTAATACATTTGCTGGTGTTCT 404
>seq156338
Length=1650
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/168 (71%), Gaps = 3/168 (2%)
Strand=Plus/Minus
Query 188374 ATGGTATATCTTAATGATGTTGAAGAAGGTGGTGAGACAGAATTTCTTTATCAACAGaaa 188433
||| | || || |||||||||||||| || ||||| || || ||| |||||||||
Sbjct 855 ATGTTTTACCTGAATGATGTTGAAGAGGGCGGTGAAACGGAGTTTTATTATCAACAACGT 796
Query 188434 aaaaTAAAACCAAAGAAAGGCACTGTTGTTATTTGGCCAGGTGGGTTTACTCATATGCAT 188493
||||||| || || ||||||||| | || ||| |||| || |||||||||| |||
Sbjct 795 AAAATAAGCCCTAAAAAAGGCACTATGGTGATTGCTCCAGCGGGTTTTACTCATAGCCAT 736
Query 188494 AGAGGTAATCCTCCAAT---GGATGATAAGTATATTGTTACTGGTTGG 188538
| || ||| || || | ||||| ||||||| ||| ||||
Sbjct 735 CGTGGCAATGTGCCCATTAGTAACGATAAATATATTGCGACTTCTTGG 688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 802250551591120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |