Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_006953.1 Length=37966 Score E Sequences producing significant alignments: (Bits) Value seq491877 257 4e-64 >seq491877 Length=500 Score = 257 bits (284), Expect = 4e-64 Identities = 360/502 (72%), Gaps = 5/502 (1%) Strand=Plus/Plus Query 10200 TCACGCGCTGCAATTGGCCTTAACTCTGAGCTAATCGAAGGCGACTTGAAGCTACGTTCA 10259 || |||| ||||||||| | || || || | | || || ||||| ||||| || Sbjct 1 TCGCGCGGTGCAATTGGTTTAAATTCAGAAATGGTTGAGGGTGACTTAAAGCTTAAGTCT 60 Query 10260 TTCTACAAAGTGGGCGGCGCTATCGCTGACCGTGATGTGAATTCAACGGCTACCGTTGCA 10319 || |||||| | |||||| |||| || ||| |||| || ||| || | ||| || Sbjct 61 TTTTACAAACTTGGCGGCTCTATTGCGTCACGTAATGTTAACTCAGTTGCAGCAGTTACA 120 Query 10320 GGTACTAAGATTGCAGCGGATGAAATGGTATCAGTGAAAGTGCCTTGGAAATATGGCCCA 10379 || | || || | ||| || ||| || || || || |||||||| |||||| Sbjct 121 GGCTCAAAAATCGGTATGGACGAGCAGGTGTCTGTTAAGTCACCGTGGAAATACGGCCCA 180 Query 10380 TACGAAACCACAGAAGAAGCATTCAAGCGTCGCGCACGCTCTCCTGAAGAGTTCTCTATG 10439 |||||||| || ||||||||||| |||||||||| |||||| ||||| || ||| Sbjct 181 TACGAAACAACTGAAGAAGCATTTAAGCGTCGCGGCAAAACTCCTGCTGAGTTTTCAATG 240 Query 10440 CTAATCGGTCAAGATATGGCTGACGCAACTATGGCTGGCTGGATTGGCTACGCACTAAAC 10499 |||||||||||||||||| ||| || | | | ||| ||| ||| ||||||||| Sbjct 241 TTAATCGGTCAAGATATGGGTGATGCCGTTCTTGATGGTTGGGTTGATTACGCACTAGCT 300 Query 10500 GCACTGCAAGGTGCGATTGGCTCTAACGCTGGCATGAATGTGTCTGGTGAGCTTGCAACC 10559 ||| | || ||| | || | ||| ||| ||||| ||| | || || || ||||| Sbjct 301 GCATTACAGGGTTCTATCAAAACAAACTCTGACATGATTGTAACAGGCGACCTAGCAACA 360 Query 10560 GAAGGTAAGAAGGTTCTTACTAAAGGTTTGCGCACAATGGGCGACAAAGCGTCATCTA-- 10617 |||||||| |||||||| || ||||| || ||||| || |||||||| || | | Sbjct 361 GAAGGTAAAAAGGTTCTAACCAAAGGCTTACGCACTAT-GGCGACAA--GTTCGGCCAAG 417 Query 10618 TCGCTATTTGGGTGATGGATTCAACGTCTTACTTCGACATCGTTGATGAAGCTATCGACA 10677 | ||||| ||||| ||||| || | || ||||||||||||||||| |||||||| | Sbjct 418 TTGCTATCTGGGTTATGGACTCTGCTTCATACTTCGACATCGTTGACCAAGCTATCAGCG 477 Query 10678 ACAAGCTTTATGAAGAAGCTGG 10699 | ||| |||||||||||||||| Sbjct 478 AAAAGATTTATGAAGAAGCTGG 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120612212885472