Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq466369 114 1e-20 seq456595 113 5e-20 seq351952 91.5 2e-13 seq506238 86.0 7e-12 >seq466369 Length=706 Score = 114 bits (126), Expect = 1e-20 Identities = 183/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 || |||||||| |||||||| | | | ||| | ||||| | ||| ||||| | Sbjct 316 CCGTGTGTTAAGTGACCACCATGAGCAAGGCTCATGCCTAATACAGTATCACCTGGTTTA 375 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 | || || ||||||||| ||||| |||||||| ||||| ||||| || || ||| Sbjct 376 ACTAATGCCATGTAAACAGCAGCATTTGCTTGTGAACCAGAATGTGGTTGTACATTCGCG 435 Query 7046 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCT 7105 ||| || ||||| || |||||||| || ||||| || ||| ||| | Sbjct 436 TAATCAGCACCAAACAATTGCTTAGCACGTTCGATTGCTAGAGACTCTGCAATATCAACA 495 Query 7106 TTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAA 7165 | |||||||||| || || ||||||||||| || || || |||||||| || |||| Sbjct 496 TACTCACAACCGCCATAGTAGCGTTTGCCTGGGTAGCCTTCTGCATACTTATTAGTAAGC 555 Query 7166 ATAGAACCTTGCGCTTTCATAAC 7188 ||| ||||| |||| ||| || Sbjct 556 TGAGAGCCTTGAGCTTCCATTAC 578 >seq456595 Length=1187 Score = 113 bits (124), Expect = 5e-20 Identities = 208/299 (70%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| || ||||||||||| | | | |||| | || || | ||| || || Sbjct 250 CCATGGGTCAAATGACCACCATGAGCAAGGTTCATCCCTAAAACGGTATCACCCGGTTGT 309 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 | |||||| | || || |||||| || || || || || || || ||||| || Sbjct 310 AACAACGCCATAAATACTGCGCTGTTTGCTTGCGAGCCTGAGTGAGGCTGTACGTTGGCA 369 Query 7046 AAA-TTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104 || ||||| | ||| | |||||| || || ||||| |||| | || | |||| | Sbjct 370 TAAGTTGCACC-AAATAATTCTTTTGCGCGTTCAATAGCCAATGTTTCAACAACATCAAC 428 Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164 | | | || || || ||||| || ||||||||||| || |||||||||||||| || || Sbjct 429 GTATTCGCACCCACCATAATAACGCTTGCCTGGATAACCTTCAGCATACTTGTTAGTTAA 488 Query 7165 AATAGAACCTTGCGCTTTCATAACATCATCGGAC--ACATAGTTTTCGGATGCAATCAA 7221 ||||||||||||| ||| ||| | | |||| ||||||||| || |||||||| Sbjct 489 CTGTGAACCTTGCGCTTCCATCACA-CGT-GGACTGGTATAGTTTTCAGACGCAATCAA 545 >seq351952 Length=416 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 65600 TGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGTAC 65659 ||| || || || |||||||| || | | ||| || | |||||| | ||||| ||||| Sbjct 33 TGTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTAC 92 Query 65660 GGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATTAACGATTGCATC 65719 || || || || ||||| || |||| || ||||| || |||||||| | |||||||| Sbjct 93 TGCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATC 152 Query 65720 TTCCAGGGTATTTC--GGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCAACAGTT 65777 | | ||||| ||| | ||||| ||||| | || ||||||||||||| | | Sbjct 153 --CAATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAATATCT 210 Query 65778 GGC 65780 ||| Sbjct 211 GGC 213 >seq506238 Length=275 Score = 86.0 bits (94), Expect = 7e-12 Identities = 126/177 (71%), Gaps = 6/177 (3%) Strand=Plus/Plus Query 65597 TTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCG 65656 || ||| || || || || | |||||| | ||||| || || ||||||| ||||| || Sbjct 48 TTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACG 107 Query 65657 TACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTG---GATTAACGAT 65713 || || || || || ||||| || |||| || ||||||||||| | | ||||| Sbjct 108 CACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAAC--- 164 Query 65714 TGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTC 65770 |||||||||| || | || | ||||| ||||| | ||| ||||||||||| Sbjct 165 AGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549718744706160