Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_007149.1
Length=39503
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 250 6e-62
>seq512931
Length=538
Score = 250 bits (276), Expect = 6e-62
Identities = 377/531 (71%), Gaps = 19/531 (4%)
Strand=Plus/Plus
Query 37432 CCTGACCACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGT 37491
||||||||| || || || || || |||||| | || || | || ||| |||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 37492 GCAGACATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCAACACAGGCTGCA 37551
|| ||||| ||||||||||||||||||||||| || ||||||| |||||| | |||
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129
Query 37552 AGAGACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCCTAATGGTACT 37611
|| || | ||||| ||||| |||||||| || || || ||| | |||||| | |||||
Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189
Query 37612 ATCATCTACCTTGGTACTCCACAATGCGAAATGACGCTATACAGAGAGCTTGAGAACCGT 37671
||||||||| | || || ||||| ||||||||| || ||||| || |||||| ||||
Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249
Query 37672 GGTTACAAGACTACTATCTGGCCAGCTCGTTATCCTAAAGATATGAACGATTTAGAGACT 37731
|| ||| ||| || |||||||| || || || ||| ||| || || | ||| |
Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309
Query 37732 TA-TGGTA----ATCGTCTTGCCCCAATG-------CTTA--AAGATGAACTA-ATGGAG 37776
|| ||| | | | | || | | | |||| | | | || | ||||
Sbjct 310 TACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGAA 369
Query 37777 AAC--CCTGAAGCTTACTGGTGGCAACCTACTGACCCTGTACGATTCGATGATGAAGACT 37834
|| | |||||| | ||| | ||||| |||||| | ||||||||||||||||||
Sbjct 370 GACGACGAGAAGCT--GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACC 427
Query 37835 TACGGGAACGTGAACTGTCTTATGGTAAAGCTGGTTTTGCTCTACAGTTCATGCTGAACC 37894
| || || || ||||| || ||||| || | ||| || ||||||||||||||||| ||||
Sbjct 428 TGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACC 487
Query 37895 CTAACCTGAGTGATGCTGAGAAATACCCTCTGAAGCTTCGTGATTTCATCG 37945
| ||||| || || ||||| ||||| ||||||| ||||||| ||||
Sbjct 488 CGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125499920415660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |