Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_007149.1 Length=39503 Score E Sequences producing significant alignments: (Bits) Value seq512931 250 6e-62 >seq512931 Length=538 Score = 250 bits (276), Expect = 6e-62 Identities = 377/531 (71%), Gaps = 19/531 (4%) Strand=Plus/Plus Query 37432 CCTGACCACTCTCCTTCTGTAAAATCAGTGGGTATCACAGGTCAGCTTACAGGTTCTCGT 37491 ||||||||| || || || || || |||||| | || || | || ||| ||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69 Query 37492 GCAGACATTCTCATTGCGGATGACGTTGAGGTTCCTAATAACTCTGCAACACAGGCTGCA 37551 || ||||| ||||||||||||||||||||||| || ||||||| |||||| | ||| Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129 Query 37552 AGAGACCGTCTTGGAGAGCTTGTAAAGGAGTTTGACGCTATCTTAAAGCCTAATGGTACT 37611 || || | ||||| ||||| |||||||| || || || ||| | |||||| | ||||| Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTACG 189 Query 37612 ATCATCTACCTTGGTACTCCACAATGCGAAATGACGCTATACAGAGAGCTTGAGAACCGT 37671 ||||||||| | || || ||||| ||||||||| || ||||| || |||||| |||| Sbjct 190 ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCGC 249 Query 37672 GGTTACAAGACTACTATCTGGCCAGCTCGTTATCCTAAAGATATGAACGATTTAGAGACT 37731 || ||| ||| || |||||||| || || || ||| ||| || || | ||| | Sbjct 250 GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTCC 309 Query 37732 TA-TGGTA----ATCGTCTTGCCCCAATG-------CTTA--AAGATGAACTA-ATGGAG 37776 || ||| | | | | || | | | |||| | | | || | |||| Sbjct 310 TACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAGGAGCTGGAA 369 Query 37777 AAC--CCTGAAGCTTACTGGTGGCAACCTACTGACCCTGTACGATTCGATGATGAAGACT 37834 || | |||||| | ||| | ||||| |||||| | |||||||||||||||||| Sbjct 370 GACGACGAGAAGCT--GTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGAAGACC 427 Query 37835 TACGGGAACGTGAACTGTCTTATGGTAAAGCTGGTTTTGCTCTACAGTTCATGCTGAACC 37894 | || || || ||||| || ||||| || | ||| || ||||||||||||||||| |||| Sbjct 428 TGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCTCAACC 487 Query 37895 CTAACCTGAGTGATGCTGAGAAATACCCTCTGAAGCTTCGTGATTTCATCG 37945 | ||||| || || ||||| ||||| ||||||| ||||||| |||| Sbjct 488 CGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGATTGGATCG 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125499920415660