Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq524053 87.8 2e-12 seq152719 87.8 2e-12 seq6427 84.2 2e-11 >seq524053 Length=516 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 62366 AAAGTGTTACCTTCGATAGGCGGCTGGACATTATCCGATCCGTTCTTTTATTTTCACGAT 62425 ||| | ||||| || | || || ||||| || || ||||| ||| | |||| | || Sbjct 240 AAAATATTACCCTCTGTGGGTGGTTGGACCTTGTCTGATCCCTTCCATGGTTTTACCAAT 299 Query 62426 GTGGCCAAACGCAAGATTTTTGTCGATTCCGTCATAGAATTTTTACAGACCTGGAAATTT 62485 ||||| ||| | | ||||| | ||| | | | | ||| |||| |||||||| ||| Sbjct 300 AAAGCCAATCGCGACACCTTTGTTGCTTCAATGAAAAAGTTTCTACAAACCTGGAAGTTT 359 Query 62486 TTCGATGGTGTCGACATCGATTGGGAGTTTCCCGGCGGGAAAGGCGCCAATCCCAACGTA 62545 | ||||| || || ||||||||||||||||| || || | || | ||||| | || Sbjct 360 TATGATGGGGTGGATATCGATTGGGAGTTTCCTGGTGGCAGTGGGCCAAATCCAGATTTA 419 Query 62546 GGCGAC 62551 |||||| Sbjct 420 GGCGAC 425 >seq152719 Length=2073 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 ||| | ||||||||||| ||| | |||||| ||||| || || ||||| || ||| Sbjct 447 GAACCCAACGACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCT 388 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || || || || || ||||| | | |||||| || || ||||| | | | || | Sbjct 387 CCAGACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTCTCC 328 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| || ||||| || || ||||||||| || | || |||||||| Sbjct 327 GACTACAACATCCAGAAAGAGTCCTGCATTCATCTGGTCTTGCGGCTGAGAGGAGG 272 >seq6427 Length=3314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| | || | || | | |||||||||||| | ||||| ||||| ||| Sbjct 3298 ATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAAAATGTCAAGGCCAAGATCCAGGAC 3239 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || ||||| || || || ||||| || || || || | | |||||| || || |||||| Sbjct 3238 AAGGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGAT 3179 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984 | | | | || |||||| ||||| || || || || || ||||||| ||||| | Sbjct 3178 GGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTCCGT 3119 Query 26985 CTTAGAGGAGG 26995 || ||||| || Sbjct 3118 CTGAGAGGCGG 3108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475518174393440