Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq524053 87.8 2e-12
seq152719 87.8 2e-12
seq6427 84.2 2e-11
>seq524053
Length=516
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 62366 AAAGTGTTACCTTCGATAGGCGGCTGGACATTATCCGATCCGTTCTTTTATTTTCACGAT 62425
||| | ||||| || | || || ||||| || || ||||| ||| | |||| | ||
Sbjct 240 AAAATATTACCCTCTGTGGGTGGTTGGACCTTGTCTGATCCCTTCCATGGTTTTACCAAT 299
Query 62426 GTGGCCAAACGCAAGATTTTTGTCGATTCCGTCATAGAATTTTTACAGACCTGGAAATTT 62485
||||| ||| | | ||||| | ||| | | | | ||| |||| |||||||| |||
Sbjct 300 AAAGCCAATCGCGACACCTTTGTTGCTTCAATGAAAAAGTTTCTACAAACCTGGAAGTTT 359
Query 62486 TTCGATGGTGTCGACATCGATTGGGAGTTTCCCGGCGGGAAAGGCGCCAATCCCAACGTA 62545
| ||||| || || ||||||||||||||||| || || | || | ||||| | ||
Sbjct 360 TATGATGGGGTGGATATCGATTGGGAGTTTCCTGGTGGCAGTGGGCCAAATCCAGATTTA 419
Query 62546 GGCGAC 62551
||||||
Sbjct 420 GGCGAC 425
>seq152719
Length=2073
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879
||| | ||||||||||| ||| | |||||| ||||| || || ||||| || |||
Sbjct 447 GAACCCAACGACACCATTGAGAATGTCAAAGCTAAGATCCAGGATAAGGAAGGCATCCCT 388
Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939
|| || || || || ||||| | | |||||| || || ||||| | | | || |
Sbjct 387 CCAGACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGACGGCCGCACTCTCTCC 328
Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||||| || ||||| || || ||||||||| || | || ||||||||
Sbjct 327 GACTACAACATCCAGAAAGAGTCCTGCATTCATCTGGTCTTGCGGCTGAGAGGAGG 272
>seq6427
Length=3314
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864
|||||| | || | || | | |||||||||||| | ||||| ||||| |||
Sbjct 3298 ATCACCCTGGAGGTTGAGCCCAGCGACACCATCGAAAATGTCAAGGCCAAGATCCAGGAC 3239
Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924
|| ||||| || || || ||||| || || || || | | |||||| || || ||||||
Sbjct 3238 AAGGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGAT 3179
Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
| | | | || |||||| ||||| || || || || || ||||||| ||||| |
Sbjct 3178 GGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTTGTCCTCCGT 3119
Query 26985 CTTAGAGGAGG 26995
|| ||||| ||
Sbjct 3118 CTGAGAGGCGG 3108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475518174393440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |