Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_007637.1 Length=45251 Score E Sequences producing significant alignments: (Bits) Value seq494738 161 3e-35 >seq494738 Length=508 Score = 161 bits (178), Expect = 3e-35 Identities = 228/318 (72%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 37786 TACGCAGGGGACCGTGCCTCAGTTAAGGCATTTGAGATTCATTACACCCTACGTGGCAGT 37845 || ||||| || | |||||| | | | ||||| |||||| | ||||| | Sbjct 34 TATGCAGGAGATAGAGCCTCAATAGAATCTTTTGATGTTCATTGGGTGTTCCGTGGAGCT 93 Query 37846 GACAAGTCGCCTTCTGTGTCTTGTTACTCAATCGAAGCAGGTATGCAGGGTGCGCGTGCA 37905 |||||||| || || || |||||||||| ||||| |||| ||||| || ||||| Sbjct 94 GACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGCGCTCGTGCT 153 Query 37906 GATATCATCCTAGCAGATGACGTTGAGTCAATGCAGAATGCTCGTACAGCGGCAGGACGT 37965 ||||| || | |||||||| ||||||| | ||||| ||||| ||| || || ||| Sbjct 154 GATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTTGCTGGCCGT 213 Query 37966 GCCTTGCTTGA-GGAACTGACCAAGGAGTTTGAATCTATTAACCAGTTTGGTGATATTAT 38024 | | | |||| ||| | |||| ||||| || ||||| ||||| |||||| ||||||| Sbjct 214 GAATGG-TTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGGTCATATTAT 272 Query 38025 CTACCTTGGTACTCCTCAGAACGTAAACTCTATCTACAATAACCTACCTGCTCGTGGTTA 38084 ||| | || || || |||| ||| | ||||||||||| || ||| |||||| || Sbjct 273 ATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAGTCGTGGCTA 332 Query 38085 CTCTGTTCGTATCTGGAC 38102 | |||||||||||||| Sbjct 333 CAAGGTTCGTATCTGGAC 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143778738166812