Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_007804.2
Length=39104
Score E
Sequences producing significant alignments: (Bits) Value
seq24926 95.1 3e-15
seq498858 93.3 1e-14
seq519417 80.6 7e-11
>seq24926
Length=5984
Score = 95.1 bits (104), Expect = 3e-15
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 2864 GCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCCAACTGAGCTAA 2923
|||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||
Sbjct 5826 GCAGGATTCGAACCTGCGACCACCCGCTTAGAAGGCGGGTGCTCTATCCAACTGAGCTAC 5767
Query 2924 TG 2925
||
Sbjct 5766 TG 5765
>seq498858
Length=398
Score = 93.3 bits (102), Expect = 1e-14
Identities = 110/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 30363 GCGACATCGTTGAGATAACTGCGTTTACTAATTGGGCTTCATAACCTAGCGTGCCGTTCA 30422
||||| | | ||| ||||| ||||| || || || |||||||| || ||||| ||| | |
Sbjct 111 GCGACTT-GATGAAATAACAGCGTTAACAAACTGCGCTTCATAGCCAAGCGTTCCGCTAA 169
Query 30423 CAACATGGGTTTTCTGAGCCACGGCAAACGGGTTCATTCCCCACTGCGCAGCCTGCATTG 30482
|||| || || || || | || || ||||| |||||| ||| || |||| |||||
Sbjct 170 CAACGTGAGTCTTTTGCCCAACTGCGAACGGATTCATTTTCCATTGAGCAGATTGCATCA 229
Query 30483 CCACGGCCATGCAATCAGCTGGTTTCCC 30510
| | ||||||||||| ||||| || ||
Sbjct 230 CGATAGCCATGCAATCGGCTGGATTGCC 257
>seq519417
Length=265
Score = 80.6 bits (88), Expect = 7e-11
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 542 ATCCTCaaaaaaaTTAAATGGCCTGACAAGGTGAAGAACCTCGAACTGATTGGTAAGCAC 601
||| | || ||||| || |||||||||||||| |||||||| || | ||||||||||
Sbjct 95 ATCATTAAGAAAATCAAGTGGCCTGACAAGGTTAAGAACCTAGAGTTACTTGGTAAGCAT 154
Query 602 GTCGACGTCAACGCATTCAAAGAA 625
| | ||| |||||||||||||||
Sbjct 155 GCCAGCGTTAACGCATTCAAAGAA 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124231088076984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |