Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq152719 87.8 1e-12 >seq152719 Length=2073 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || || | ||| || |||||||| || || ||||||||||||| Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| |||| || ||||| ||| | || |||| ||| || || ||| Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || ||| || || | | | ||||||| ||| || Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCT--TTGACATTCTCAATGGTGTCGCTGGGTTCAA 221 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||| || || ||||| || || ||||| |||||||| Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402493591370980