Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 87.8 1e-12
>seq152719
Length=2073
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| || | || || | ||| || |||||||| || || |||||||||||||
Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | |||| |||| || ||||| ||| | || |||| ||| || || |||
Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| || || || || ||| || || | | | ||||||| ||| ||
Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCT--TTGACATTCTCAATGGTGTCGCTGGGTTCAA 221
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||| || || ||||| || || ||||| ||||||||
Sbjct 222 CCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402493591370980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |