Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008152.1
Length=44385
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 159 1e-34
seq502596 100 8e-17
>seq494738
Length=508
Score = 159 bits (176), Expect = 1e-34
Identities = 205/280 (73%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 36143 CGTGGTAGTGATAAGTCTCCTTCTGTATCCTGTTACTCAATCGAAGCAGGTATGCAGGGT 36202
||||| ||| |||||||| || || | |||||||| ||||| |||| |||||
Sbjct 85 CGTGGAGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGC 144
Query 36203 GCTCGTGCTGATATTATTCTAGCGGATGACGTAGAGTCGATGCAGAATGCTCGTACGGCA 36262
|||||||||||||| || | || ||||| | ||||| | ||||| ||||| | |
Sbjct 145 GCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTT 204
Query 36263 GCGGGCCGTGCCTTGCTTGA-GGAGCTGACTAAGGAGTTTGAATCTATCAACCAGTTTGG 36321
|| ||||||| || |||| ||||| ||| ||||| || ||||||||||| |||||
Sbjct 205 GCTGGCCGTG-AATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGG 263
Query 36322 GGATATCATTTACCTTGGTACACCTCAGAACGTAAACTCTATCTACAACAACCTACCTGC 36381
|||| || ||| | || ||||| |||| ||| | |||||||||||| || |||
Sbjct 264 TCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAG 323
Query 36382 TCGTGGTTACTCTGTTCGTATCTGGACTGCGCGTTACCCT 36421
|||||| ||| |||||||||||||| | | ||||||
Sbjct 324 TCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCT 363
>seq502596
Length=783
Score = 100 bits (110), Expect = 8e-17
Identities = 102/129 (79%), Gaps = 3/129 (2%)
Strand=Plus/Plus
Query 19023 TATGACCTTACTT-GTATTGGCTTTGAAGAAGGTAAAGGCAAATACAAAGGTAAGGTAGC 19081
|||||| |||||| ||||||||| ||| ||||| | || || || ||||| ||||||||
Sbjct 345 TATGAC-TTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGC 403
Query 19082 TAACCTCATTTTCAAATGGAAAGGAGGCAAGACAATCAAAGCTATGTTAGGTAAGGGGTG 19141
||| || | || || |||||||| ||| || |||||||||||| | || |||| ||
Sbjct 404 TAATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTTG 462
Query 19142 GACTCATGC 19150
|||||||||
Sbjct 463 GACTCATGC 471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141024831386628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |