Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_008152.1 Length=44385 Score E Sequences producing significant alignments: (Bits) Value seq494738 159 1e-34 seq502596 100 8e-17 >seq494738 Length=508 Score = 159 bits (176), Expect = 1e-34 Identities = 205/280 (73%), Gaps = 2/280 (1%) Strand=Plus/Plus Query 36143 CGTGGTAGTGATAAGTCTCCTTCTGTATCCTGTTACTCAATCGAAGCAGGTATGCAGGGT 36202 ||||| ||| |||||||| || || | |||||||| ||||| |||| ||||| Sbjct 85 CGTGGAGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACAGGGC 144 Query 36203 GCTCGTGCTGATATTATTCTAGCGGATGACGTAGAGTCGATGCAGAATGCTCGTACGGCA 36262 |||||||||||||| || | || ||||| | ||||| | ||||| ||||| | | Sbjct 145 GCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTCAGTT 204 Query 36263 GCGGGCCGTGCCTTGCTTGA-GGAGCTGACTAAGGAGTTTGAATCTATCAACCAGTTTGG 36321 || ||||||| || |||| ||||| ||| ||||| || ||||||||||| ||||| Sbjct 205 GCTGGCCGTG-AATGGTTGATGGAGCAGACCTTAGAGTTCGAGTCTATCAACCAATTTGG 263 Query 36322 GGATATCATTTACCTTGGTACACCTCAGAACGTAAACTCTATCTACAACAACCTACCTGC 36381 |||| || ||| | || ||||| |||| ||| | |||||||||||| || ||| Sbjct 264 TCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGGCTGCCTAG 323 Query 36382 TCGTGGTTACTCTGTTCGTATCTGGACTGCGCGTTACCCT 36421 |||||| ||| |||||||||||||| | | |||||| Sbjct 324 TCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCT 363 >seq502596 Length=783 Score = 100 bits (110), Expect = 8e-17 Identities = 102/129 (79%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 19023 TATGACCTTACTT-GTATTGGCTTTGAAGAAGGTAAAGGCAAATACAAAGGTAAGGTAGC 19081 |||||| |||||| ||||||||| ||| ||||| | || || || ||||| |||||||| Sbjct 345 TATGAC-TTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGC 403 Query 19082 TAACCTCATTTTCAAATGGAAAGGAGGCAAGACAATCAAAGCTATGTTAGGTAAGGGGTG 19141 ||| || | || || |||||||| ||| || |||||||||||| | || |||| || Sbjct 404 TAATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTTG 462 Query 19142 GACTCATGC 19150 ||||||||| Sbjct 463 GACTCATGC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141024831386628