Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 392 4e-104
seq496362 168 8e-37
seq388653 111 2e-19
seq103378 96.9 4e-15
>seq44246
Length=4029
Score = 392 bits (434), Expect = 4e-104
Identities = 1157/1779 (65%), Gaps = 12/1779 (1%)
Strand=Plus/Minus
Query 62174 AGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTA 62233
|| ||||| || || || | || || ||||| |||| || | || ||||| || ||
Sbjct 1774 AGCAGATGGGGGTTGACGATCTGGAACTCTCCTGACAGGACCCGGCGGGTGTAGATGTTG 1715
Query 62234 CTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGC 62293
||||| || | || | ||||| || || |||| || || || || || || || |||
Sbjct 1714 CTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGC 1655
Query 62294 ATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGT 62353
|| || |||| || | || || || | |||| | ||| || || || || |
Sbjct 1654 ATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCCTTCAGCAGC 1595
Query 62354 TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNT--TGTAGAATACCGT 62411
| ||| | ||| || || | || | | | || || || || |
Sbjct 1594 TTCCAGTCCCACAGGTCGGTGGG--CGTCTTCTCCCACATGTCGTACTGGAGGATGCCCT 1537
Query 62412 TACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAAC 62471
| ||| || || ||| | || || ||||| || || || | || ||||| || |
Sbjct 1536 TGCTGACGGGGGAGCCT-CGTACGTGTCGTAGGGGCCCAGCTCGGCGGCCAGTTCGCAGC 1478
Query 62472 TCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTT 62531
| ||||| | || |||| || ||||| || ||||||| | || || || || |
Sbjct 1477 TGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGGGCCT 1418
Query 62532 CCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAA 62591
| |||| ||||| || ||| | || || || ||||| || | || || || || |
Sbjct 1417 CGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGGCCCTGGACGCCGA 1358
Query 62592 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 62651
||||||| || || || | ||| || || || || || || | || || | ||||
Sbjct 1357 TACCGATCGGCCTGTGGCGCTTGTTGGACTGATCGGCCTCGGGCACCGGGTAGAAGTTAA 1298
Query 62652 TATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAA 62711
| ||||| || || || || || | || || |||||| |||| || |||||| |
Sbjct 1297 TCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACAGACTCCAGTTTCTTGA 1238
Query 62712 AATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGATTACAAA 62768
| ||||| || || | || ||||||| | || | || ||||||||||| |
Sbjct 1237 AGTCAAAAGTCCGCTCGGGGGTGACGTACATGTTGAGAGCGATGGAGGCCAGATTACACA 1178
Query 62769 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62828
| || ||||||| || | |||| | || || ||||| || || || |||||||
Sbjct 1177 CAGCGACCTCATCGCCACTGGAGTATTCAACGATTTCCGTGCAGAGGTTGCTGCACTTGA 1118
Query 62829 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 62888
||||||| | || || || || ||||| |||| || || || || || || ||| | |
Sbjct 1117 TGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAGCATGTACG 1058
Query 62889 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 62948
| || || | || |||| || || || || || | ||| || ||||||| | |
Sbjct 1057 GCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGAGCCTTCACCA 998
Query 62949 TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 63008
| ||| | || | || ||| | || || | || ||||| || ||||
Sbjct 997 CACGCTTGACCCGGCCCTCCCGCTCATATTGGGTGTAGAGCTTCTCAAACTCCTCCCCCC 938
Query 63009 AAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63068
| | |||||| || || | || |||||||||| ||||| || || ||
Sbjct 937 AGCACTCGTCCAGCCCGGGGCTCTCGCTGGGACACATCAGAGACCAGTCCTGGTTGCTCT 878
Query 63069 TCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTA 63127
||| | ||||| || || || || ||||| | ||| || || |||||||||| |||
Sbjct 877 CCACCCTCTTCATGAACAGGTCGGGGATCCACA-AGCCGTAGAAGAGATCTCTGGCTCTC 819
Query 63128 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63187
|| ||||| || || || ||||| || || || ||||| | | | ||| | ||||||
Sbjct 818 TGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCGAACACGTCAAAGTGCCAC 759
Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247
|| |||| ||| ||||| | | || || || ||||| || ||||| || | || |
Sbjct 758 GGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACATAGCGT 699
Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307
|| ||||| || || || |||| ||| || | | || ||||| | || ||||| ||
Sbjct 698 GCTGTGTTGTTGTAGACCCTCAGCATGGGGACCAGCCCGTTGGAGTTGCCGTTGGTGCCG 639
Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATT 63367
| ||| ||||| || ||| || || || | | | ||| ||||| ||||||
Sbjct 638 GCGATGTAGCTCCCGGTGGATCGGATGCAGCTGACGGCCACACCGATTCCTCCTGCCGAC 579
Query 63368 TTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 63427
|| ||||| | ||| || | || | ||| || ||||||||||| || || || ||| ||
Sbjct 578 TTGGAGATGAGTGCACACTGCTTCAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTC 519
Query 63428 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 63487
||| | || || || ||||| || | || | || | ||||| || || || | ||
Sbjct 518 ATGGTGAGCAGGAAGCAGCTGGAGAGCTGAGGCCGGTTGGTTCCTGCGTTGAAGAGCGTG 459
Query 63488 GGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63547
|| || ||||| || ||||| || || || || || ||||| ||||| || || | |||
Sbjct 458 GGGGAGGCGTGGGTGAACCACTTCTCCGAGAGCAGGTTGTAGGTCTCGATGGCGGCGTCG 399
Query 63548 ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACG 63607
|||||| | || ||||| || | || | ||| | ||||||||| || | || |
Sbjct 398 ATATCCGTCTTGTGGATTCCGACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCCGCC 339
Query 63608 ATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63667
| ||| ||| || |||| || ||||||| |||| || || || || || |||||
Sbjct 338 ACTTTGCCGTTGATCTTCAGCAGGTAGGATCGCTCCAGCGTCTTGAAGCCGAAGAAGTTG 279
Query 63668 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 63727
|| || || |||| ||| | || || |||||||||| ||||| | | |||
Sbjct 278 TAGGAGAAATCTCTGTCGAAGATGATGGCCGAGTTGAGGCGGTCCTTGTGGGCGAGAACG 219
Query 63728 ACATCCATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATA 63786
| || | ||| | ||| || || || || | || | || ||| |||| ||
Sbjct 218 ATGTCGAGGGT-CTCCTTGGAGATCATGGGGGAGTGGCGTCTGTTCAGAGGGTTGATGTA 160
Query 63787 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 63846
| || | | ||||||||||| ||||| || | || || || || ||||| || || ||
Sbjct 159 GCTGTACAGGTCCTCCATCACCTCACTGAAAACCTTCTTCGTCTCCTTGTGCAGGTTGGA 100
Query 63847 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 63906
||||| || | ||||| || ||||| || ||||| |||| || || ||||| |
Sbjct 99 GACGGCGATCCGGGCGGCGAGGATGGCGTAGTCCGGGTGTTTGGTGGTGAGGGTGGCGGT 40
Query 63907 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 63945
|| || || ||||| ||||||| || || || || ||
Sbjct 39 GATCTCTGCAGCCAGGGTGTCCAGCTCCACGGTGGTGAC 1
>seq496362
Length=882
Score = 168 bits (186), Expect = 8e-37
Identities = 404/597 (68%), Gaps = 22/597 (4%)
Strand=Plus/Minus
Query 32663 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 32722
||||||||| ||||| | ||| ||||| | | ||| |||||||| || || || | |||
Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572
Query 32723 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 32782
||||| | || || ||||| | ||| || ||||| ||| | || || ||||||||
Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512
Query 32783 TCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCA 32842
|||||| ||||| ||||| ||||| | || |||| | || | ||| || |||||
Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA--GAATCTG-AATCAATCCA 455
Query 32843 CTTTTGA---GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899
|||| ||||| || || |||||||| | | ||| | |||| || || ||
Sbjct 454 ---TTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAA 398
Query 32900 GAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
| || | ||| || | || ||||| ||||| || || || || | |||| ||
Sbjct 397 TAAATCGGCTTTCTC--TGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTT 340
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAG-AAGCATCTAGCCTCGGTAAT 33016
|| ||||| ||||| || ||||| || || ||| ||| || | || || | |
Sbjct 339 TCGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATA 280
Query 33017 CTGTACTTC-TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075
|| ||||| | |||||| | ||| || | ||||||||| || |||||||| || |
Sbjct 279 TTGCACTTCATTTACAAAGT-TTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGG 221
Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT--AGT--TTATTC 33131
| ||||| || || | ||||| ||||| |||| ||||||| | || | | ||||||
Sbjct 220 CGAAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTCT-TTATTCAACTTGTTATTC 162
Query 33132 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33191
|| || || | ||||| || | ||| | |||||| | ||||| || | |||
Sbjct 161 CAGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAA-ACTCGCTCCATG 103
Query 33192 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAttt 33248
|||||| | | ||| || || || | | || |||||||| ||||| | ||||
Sbjct 102 GATTTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAAACGATTT 46
>seq388653
Length=382
Score = 111 bits (122), Expect = 2e-19
Identities = 264/389 (68%), Gaps = 14/389 (4%)
Strand=Plus/Minus
Query 62763 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATT-ACT 62820
|||| || ||||| |||| || | | |||| || ||||| || || ||| || ||
Sbjct 382 TACACACTGCTACTTCATCAGGAGAGGTGTATTCCATGATCTCTGTACACAAGTTTGACG 323
Query 62821 ACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAG 62880
| || || ||||||||||| | ||| || || ||| |||||| ||||| |
Sbjct 322 A-ACGA-ATAGTTCCTAAATTCTTTTGGTTTGATTTACGGTTTGCCGCATCTTTATATAA 265
Query 62881 AATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC-CAGACGACTC--G 62937
|| | ||||| ||||| || || |||||||||| ||| |||| | || | || |
Sbjct 264 CATATACGGAGTTCCAGTCTCGATTTGAGATTCTAGAAT---TTTCTCCCACAATTCATG 208
Query 62938 AGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGT--ATACAATCGTTCG 62995
|| || ||| | ||| || || || ||||| ||| | ||| ||| |||
Sbjct 207 TGCTTTAATTGTT--TTTCTACCTTTTCCAGCTTTCTCGTAGCTTTCATATAATGCTTCA 150
Query 62996 AACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCAC 63055
||||| || || |||||| || || |||||||||||| | |||||||| || | |||
Sbjct 149 AACTCTTCACCATAAACATCGTACAATCCAGGACATTCGTTAGGACACATTAAAGTCCAG 90
Query 63056 TCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 63115
| |||||| || | || |||||||| || | ||||| | |||| | || | |||| |
Sbjct 89 TTTCCGTCTTCTTGTACACGTTTCATGAATAAATCAGAAGTCCACATGGCAAAGAATAAA 30
Query 63116 TCTCTGGTTCTATGTTCCTCGTTTCCTGT 63144
||||| | | ||| || ||||||||
Sbjct 29 TCTCTTGCACGCATTTCTTCTTTTCCTGT 1
>seq103378
Length=1867
Score = 96.9 bits (106), Expect = 4e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTG 63526
|| || ||||| || | ||||| || ||||| || ||||| ||||| || || | |||
Sbjct 579 GTGCCGGCATTGAACAGTGTAGGTGAGGCGTGGGTGAACCACTTTTCCGACAGCAAGTTG 520
Query 63527 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63586
||||||||||| |||| || || || | || ||||| || || || || | ||||| |
Sbjct 519 TACGTCTCAATGGCTGCATCGATGTCTCTTTTGTGAATCCCGACGGCCACTCTCATTAGC 460
Query 63587 ATGTGCTGAGGTCTTTCA 63604
|||||||| ||||| |||
Sbjct 459 ATGTGCTGGGGTCTCTCA 442
Score = 84.2 bits (92), Expect = 3e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 62800 TATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 62859
|||||| ||||| ||||| || | ||||||||||| | ||| || || || |||||
Sbjct 1774 TATCTCTGTGCACAGATTGCTGGATTTGATGGTTCCCAGATTCTGCTGGTTGCTCTTCCC 1715
Query 62860 GTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 62919
||| || || ||||| || || ||| | || ||||| |||||| |||| || || || ||
Sbjct 1714 GTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTACCCGTTTCAGTCTGTGACTCGATGAT 1655
Query 62920 CGCTTTCCA 62928
|| | |||
Sbjct 1654 GGCGTACCA 1646
Score = 82.4 bits (90), Expect = 1e-10
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129
|||||||||||| ||||| || || ||||| || || | || || ||||||| || ||
Sbjct 1333 CACTCGTTTCATGAAGAGGTCTGGGATCCACAGGGCGAAGAACAGGTCTCTGGCCCTCTG 1274
Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189
||||| || ||||| ||||| || | || | |||| | | | || ||||||||||
Sbjct 1273 CTCCTCTTTACCTGTGTTCTTCTTCATCTCTAAGAACTCAAACACGTCCAAATGCCACGG 1214
Query 63190 TTCCAAGTATATGGC 63204
|||| ||| | |||
Sbjct 1213 CTCCAGGTACACGGC 1199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629469813959200
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