Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq496362 183 3e-41 >seq496362 Length=882 Score = 183 bits (202), Expect = 3e-41 Identities = 413/610 (68%), Gaps = 22/610 (4%) Strand=Plus/Minus Query 93112 ACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTT 93171 ||||||||| || || ||||| || || |||||| || ||||| | || |||||||| Sbjct 613 ACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCCTGGCATCAAACCTCGTTT 554 Query 93172 CTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAA 93231 || | ||| || || ||| |||| ||| || || || || |||||||| |||||||| Sbjct 553 TTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAATTCCTTCCACTGCTGCAAA 494 Query 93232 TGCCA-CAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAAT 93290 || | |||| || || || ||| | |||| | ||||||| | ||||| | Sbjct 493 AGCAATCAAT-CGCTCTGCGAAAGAATCTGAATCA------ATCCATTGAATTGCCCAGT 441 Query 93291 CGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGT 93350 | ||||| || || ||| ||| | ||| | ||||| |||| | || ||| Sbjct 440 CCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAATAAATCGGCTTTCTCTG 381 Query 93351 CCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCA 93410 | ||| || || || |||||||||| |||||| |||| || | ||| |||| Sbjct 380 CTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTTCGCTGTGAATATTTTCCA 321 Query 93411 TTGCAATTTGGAATCCGTAGAAACA-TCTAGCTTCCGTGATCTGCACTTC-TTGAGAAAA 93468 | |||||||| || |||||| | | | ||||| | |||||||| || | ||| Sbjct 320 TCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATATTGCACTTCATTTACAAAG 261 Query 93469 TCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATG 93528 | | || | ||||||||||| || || || || || || || ||||| || || || || Sbjct 260 TTT-TCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCGAAAAATGCTAAAATGTG 202 Query 93529 CTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGA 93585 || ||||| | || || || | || | | |||| ||| ||| || ||||| ||| Sbjct 201 TTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTCCAGTCGTTTAAATCTTGTGA 142 Query 93586 AAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC-TGCTTTTTTGTACATATCCCATA 93644 | ||| | ||||||| ||||||| || ||| | || ||| || | ||||| | Sbjct 141 CAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATG--GATTTATAAAATTCCCAAA 84 Query 93645 TGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAA---CG 93701 | ||||| | | || ||||| |||||||||||||| |||| || | |||| | Sbjct 83 TATCTTGGTGCTTGATCGGAAAAATGACAAAACGATT--TTTTATTTTCTTGTAAAATTG 26 Query 93702 GCTCTAGTTG 93711 |||||| ||| Sbjct 25 GCTCTACTTG 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553202906698480