Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq496362 183 3e-41
>seq496362
Length=882
Score = 183 bits (202), Expect = 3e-41
Identities = 413/610 (68%), Gaps = 22/610 (4%)
Strand=Plus/Minus
Query 93112 ACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTT 93171
||||||||| || || ||||| || || |||||| || ||||| | || ||||||||
Sbjct 613 ACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCCTGGCATCAAACCTCGTTT 554
Query 93172 CTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAA 93231
|| | ||| || || ||| |||| ||| || || || || |||||||| ||||||||
Sbjct 553 TTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAATTCCTTCCACTGCTGCAAA 494
Query 93232 TGCCA-CAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAAT 93290
|| | |||| || || || ||| | |||| | ||||||| | ||||| |
Sbjct 493 AGCAATCAAT-CGCTCTGCGAAAGAATCTGAATCA------ATCCATTGAATTGCCCAGT 441
Query 93291 CGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGT 93350
| ||||| || || ||| ||| | ||| | ||||| |||| | || |||
Sbjct 440 CCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGAATAAATCGGCTTTCTCTG 381
Query 93351 CCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCA 93410
| ||| || || || |||||||||| |||||| |||| || | ||| ||||
Sbjct 380 CTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTTCGCTGTGAATATTTTCCA 321
Query 93411 TTGCAATTTGGAATCCGTAGAAACA-TCTAGCTTCCGTGATCTGCACTTC-TTGAGAAAA 93468
| |||||||| || |||||| | | | ||||| | |||||||| || | |||
Sbjct 320 TCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATATTGCACTTCATTTACAAAG 261
Query 93469 TCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATG 93528
| | || | ||||||||||| || || || || || || || ||||| || || || ||
Sbjct 260 TTT-TCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCGAAAAATGCTAAAATGTG 202
Query 93529 CTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGA 93585
|| ||||| | || || || | || | | |||| ||| ||| || ||||| |||
Sbjct 201 TTTGATAAAGTATTGTTCGTCTTTATTCAACTTGTTATTCCAGTCGTTTAAATCTTGTGA 142
Query 93586 AAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC-TGCTTTTTTGTACATATCCCATA 93644
| ||| | ||||||| ||||||| || ||| | || ||| || | ||||| |
Sbjct 141 CAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATG--GATTTATAAAATTCCCAAA 84
Query 93645 TGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAA---CG 93701
| ||||| | | || ||||| |||||||||||||| |||| || | |||| |
Sbjct 83 TATCTTGGTGCTTGATCGGAAAAATGACAAAACGATT--TTTTATTTTCTTGTAAAATTG 26
Query 93702 GCTCTAGTTG 93711
|||||| |||
Sbjct 25 GCTCTACTTG 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553202906698480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |