Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq152719 82.4 6e-11 >seq152719 Length=2073 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111172 TATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTG 111231 || || ||| | || ||||| || ||||| || || |||| || || || || || || Sbjct 741 TACAACAGTGTCAAGATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACTATCACTCTG 682 Query 111232 GAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGC 111291 || ||||||||||| | ||| | |||||| || || || || || ||| Sbjct 681 GAGGTTGAACCCAGCGACACCATTGAGAATGTAAAAGCTAAGATCCAGGATAAGGAGGGC 622 Query 111292 GTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACT 111351 | || ||||| || ||||| || | ||| ||||| || |||||||| | || Sbjct 621 ATCCCTCCTGATCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGTCGCACC 562 Query 111352 ATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111401 ||| | |||||||| || || |||||||| || | ||| | ||| |||| Sbjct 561 ATGTCAGATTATAACATCCAGAAAGAATCCACCATCCATCTTGTGCTGCG 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420330616788400