Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq238054 95.1 2e-14
seq192246 95.1 2e-14
seq138847 95.1 2e-14
seq253432 93.3 9e-14
seq41456 93.3 9e-14
seq140745 91.5 3e-13
seq113143 91.5 3e-13
seq444848 89.7 1e-12
seq238055 89.7 1e-12
seq3370 89.7 1e-12
seq89923 86.0 1e-11
seq52696 86.0 1e-11
seq8517 86.0 1e-11
seq2548 86.0 1e-11
>seq238054
Length=789
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 647 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 706
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 707 AGCCCCACGTTGGGC 721
>seq192246
Length=1030
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 879 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 938
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 939 AGCCCCACGTTGGGC 953
>seq138847
Length=925
Score = 95.1 bits (104), Expect = 2e-14
Identities = 72/84 (86%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 142493 GTGGTGAGATA-GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTC 142551
|||| |||| | |||||| |||||||||||||||||| ||||||||||||| ||||
Sbjct 767 GTGGCGAGACAAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTC 826
Query 142552 GTGGGTTCGAGCCCCACATCGGGC 142575
||||||||||||||||| | ||||
Sbjct 827 GTGGGTTCGAGCCCCACGTTGGGC 850
>seq253432
Length=930
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 151 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 92
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 91 GAGCCCCACGTTGGGC 76
>seq41456
Length=1434
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 149 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 90
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 89 GCCCCACGTTGGGC 76
>seq140745
Length=1021
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 150 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 91
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 90 CCCCACGTTGGGC 78
>seq113143
Length=821
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 152 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 93
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 92 AGCCCCACGTTGGGC 78
>seq444848
Length=522
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 148 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 89
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 88 CCCACGTTGGGC 77
>seq238055
Length=523
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 375 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 434
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 435 CCCACGTTGGGC 446
>seq3370
Length=3486
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 149 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 90
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 89 CCCACGTTGGGC 78
>seq89923
Length=1497
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 1 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 60
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 61 TCCCGGCAGAGA 72
>seq52696
Length=3658
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 2486 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 2545
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 2546 TCCCGGCAGAGA 2557
>seq8517
Length=384
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGT-CGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct 152 AGCCCGGCTAGCTCAGTTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 211
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 212 GCCCCACGTTGGGC 225
>seq2548
Length=522
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGT-CGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||
Sbjct 84 AGCCCGGCTAGCTCAGTTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 143
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 144 GCCCCACGTTGGGC 157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1020916380607182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |