Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq6427 154 3e-32
seq152719 149 1e-30
seq152718 149 1e-30
seq59938 141 2e-28
seq59939 127 4e-24
seq524514 91.5 3e-13
seq219309 91.5 3e-13
seq232995 84.2 4e-11
>seq6427
Length=3314
Score = 154 bits (170), Expect = 3e-32
Identities = 150/189 (79%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || |||||||| || |||||||| || |||||||| || | |||||||| |
Sbjct 3127 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 3186
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| ||||| || || || || || || || || ||||||||||||||||| || |
Sbjct 3187 GCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 3246
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTT 68432
|||| |||||||| ||||||||||| ||| | || || |||| ||||||||| ||
Sbjct 3247 TCTTGGCCTTGACATTTTCGATGGTGTC-GCTGGGCTCAACCTCCAGGGTGATGGTCTTG 3305
Query 68433 CCCGTGAGG 68441
|||||||||
Sbjct 3306 CCCGTGAGG 3314
>seq152719
Length=2073
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || ||||| |||| || | ||||||||| |||||||| || ||||||
Sbjct 272 CCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAG 331
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| ||||| || ||||| || || ||||| || ||
Sbjct 332 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 391
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| || || ||||| || ||||| ||| |||||||| | ||| ||
Sbjct 392 ATGCCTTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGTTGGGTTCAACC 451
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| ||||| || || || ||||||||||| || || ||||| ||
Sbjct 452 ACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498
Score = 147 bits (162), Expect = 4e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||||| | || | || || ||||||||||| |||||||| || ||||||
Sbjct 44 CCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAG 103
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| ||||| || || || || || || || || ||
Sbjct 104 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 163
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
||||| ||||| || || ||||| || ||||| ||| |||||||| ||| | ||| ||
Sbjct 164 ATGCCCTCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTC-GCTGGGTTCAAC 222
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||||| || || || |||||||| || || ||||||||
Sbjct 223 CTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
Score = 134 bits (148), Expect = 3e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||| ||||| |||||||||||||| || | || | |||||||| | |||||| |||
Sbjct 530 GTGGATTCTTTCTGGATGTTATAATCTGACATGGTGCGACCATCTTCCAGCTGCTTGCCG 589
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || || || || || || || || ||||| ||||| || || ||||| || ||
Sbjct 590 GCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCCTGGATCTTAGCTTTT 649
Query 68385 ACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGT 68443
|| ||| |||||||| ||| | ||| || |||| ||||| || || || || |||||
Sbjct 650 ACATTCTCAATGGTGTC-GCTGGGTTCAACCTCCAGAGTGATAGTCTTACCAGTCAGGGT 708
Query 68444 CTTGACGAATATCTGCAT 68461
||| || || ||||||||
Sbjct 709 CTTCACAAAGATCTGCAT 726
>seq152718
Length=3078
Score = 149 bits (164), Expect = 1e-30
Identities = 166/219 (76%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| ||||| || | || || ||||||||||| |||||| | || |||||||| || |
Sbjct 2156 AGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCGGAGAGAGTGCGA 2215
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || | || || | || |||||||||
Sbjct 2216 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAAGGGATGCCTTCC 2275
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422
|| || |||||||| | ||||| ||| |||||||| ||| | ||| || |||| ||
Sbjct 2276 TTATCCTGAATCTTAACTTTGACATTCTCAATGGTGTC-GCTGGGTTCAACCTCCAGAGT 2334
Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||| || || || |||||||| || || ||||||||
Sbjct 2335 GATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373
Score = 113 bits (124), Expect = 8e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | || ||||| |||| || || || |||||||| |||||| | || ||||||
Sbjct 2375 CCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTCGGAG 2434
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | | ||||| | | |||| ||| | || |||| || || ||||| | ||
Sbjct 2435 AGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGTAGGG 2494
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
| |||||||| ||||| ||||| || |||| || |||||||| | ||| ||
Sbjct 2495 AATCCTTCCTTATCTTGGATCTTGGCTTTGAAATTATCAATGGTGTCACTGGGTTCAACC 2554
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | || || || || ||||||||||| || || ||||| ||
Sbjct 2555 TCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601
Score = 91.5 bits (100), Expect = 3e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321
|| ||||| || |||| | |||| || |||||| | |||| ||||| || | ||| ||
Sbjct 1946 AGGGTGGATTCCTTTTTGCTGTTGTAGTCGGAGGGAGTCCGGCCATCATCCAGCTGTTTG 2005
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| |||| || || || || || || || | ||||||| ||| || ||||||||
Sbjct 2006 CCCTCGAAGATCAGGCTCTGCTGCTCTGGATGGATGCCTTTCTTATCCTGAATCTTGTAT 2065
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
||||| |||||||||||| || || | || | ||| |||| || | | |||
Sbjct 2066 TTGACATTCTCGATGGTGTCACTGGACTCAATCTCAAGAGTGGTGGTCTTAGCAATCAGG 2125
Query 68442 GTCTTGACGAATATCTGCAT 68461
||||| || || ||||| ||
Sbjct 2126 GTCTTCACAAAGATCTGGAT 2145
>seq59938
Length=2926
Score = 141 bits (156), Expect = 2e-28
Identities = 148/191 (77%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321
|| |||||||| || |||||||| || ||||| || | |||||||| | |||||
Sbjct 2739 AGGGTGGACTCCTTCTGGATGTTGTATA--GAGAGGGTGCGGCCATCTTCCGAATGCTTG 2796
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
||||| || || || || || || || || ||||||||||||||||| || ||||| |||
Sbjct 2797 CCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 2856
Query 68382 TTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAG 68440
||||| || |||||||| ||| | || || |||| ||||||||| || || |||||
Sbjct 2857 TTGACATTTTCAATGGTGTC-GCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAG 2915
Query 68441 GGTCTTGACGA 68451
|||||||||||
Sbjct 2916 GGTCTTGACGA 2926
>seq59939
Length=800
Score = 127 bits (140), Expect = 4e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | |||||| ||||| || || || || || || || || ||||||||||||
Sbjct 8 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCC 67
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| |||||||| ||||| ||||| | || || || | ||||
Sbjct 68 TTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTG 127
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || |||||||||||||| || || ||||||||
Sbjct 128 ATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 165
>seq524514
Length=249
Score = 91.5 bits (100), Expect = 3e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 268534 CTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTT 268593
|||||||||||||||| |||| ||| |||| || || || || ||||| ||||| ||
Sbjct 7 CTTTTGAGGGATTTCTTTCACTTCACCATAGAGTTCAGAAGTAGAAGCTTGATAGAATTT 66
Query 268594 TGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCC 268653
||| | ||||| | ||| | | || || || || | ||||| | || ||||| |
Sbjct 67 AGTTTTCTTTTCTAAACCTAAAAAACGTATAGCTTCTAATAAACGTAATGTGCCCATTGC 126
Query 268654 ATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCC 268713
||| ||||| || || || || || ||| || || || ||||| ||| || ||
Sbjct 127 ATCTACGTCTGCGGTGTATTCTGGACACTCAAACGAAACGGCAACATGCGACTGAGCACC 186
Query 268714 CAGGTTATAAACCTCATCCGGTT 268736
|| ||||| || ||||| ||||
Sbjct 187 CAAATTATATACTTCATCAGGTT 209
>seq219309
Length=251
Score = 91.5 bits (100), Expect = 3e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAG 268462
||||||||||||||||| ||||| |||||| ||||||||||| || ||||| ||| ||
Sbjct 228 GGGCTCTCGTGGTTGAACAGGATCCCGTTGACGGCGAACATGCCGTAGGCCTCTCGGAAG 169
Query 268463 TTCACGACCGTCCAGTATGCAAACATCTTTGCA 268495
||||| || ||||||| ||| | | ||| |||
Sbjct 168 TTCACCACGATCCAGTAAGCATAAAGCTTCGCA 136
>seq232995
Length=1990
Score = 84.2 bits (92), Expect = 4e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||||||| | |||||||||| || || ||| |||||||||| ||| |||||
Sbjct 1640 CATGACGCCCATCCTCTGGTACTCGCCCACACGCTTCTCAAAGAAGTTGGTCTTTCCCTC 1699
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|| || ||| |||||||||||| |||||||||||
Sbjct 1700 CAGAGAGATGTTCTCCATGAAGTCGAAGGGGTTCTC 1735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915568469819440
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