Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 93.3 3e-14
seq459 89.7 4e-13
>seq152719
Length=2073
Score = 93.3 bits (102), Expect = 3e-14
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
|||||||||||| || ||||| ||||| || ||| ||| ||||| |||||||| || |
Sbjct 43 ACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 102
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| | || || |||| |||| |||||||||||||| ||||| | |||||||||
Sbjct 103 GAGAGTG-CGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATC 156
Score = 87.8 bits (96), Expect = 1e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||||||||||| |||||||| ||||| | ||| || ||||| ||||| |||||||
Sbjct 499 ACCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGA 558
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| || || || | || |||| |||||||||||||| ||||| | |||||||||
Sbjct 559 C-ATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATC 612
>seq459
Length=1892
Score = 89.7 bits (98), Expect = 4e-13
Identities = 75/88 (85%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 115584
|| |||||||| ||||| ||||| |||| |||||||||||||| |||| |||| ||||
Sbjct 258 TGGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTAACGTGAGAGCGATCAAAGG 199
Query 115585 AACCAAAACTGATATATTGAGCCATTCG 115612
||||| ||||||| || |||||||||||
Sbjct 198 AACCATAACTGATTTAATGAGCCATTCG 171
Score = 89.7 bits (98), Expect = 4e-13
Identities = 75/88 (85%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGG 114387
|| |||||||| ||||| ||||| |||| |||||||||||||| |||| |||| ||||
Sbjct 258 TGGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTAACGTGAGAGCGATCAAAGG 199
Query 114388 AACCAAAACTGATATATTGAGCCATTCG 114415
||||| ||||||| || |||||||||||
Sbjct 198 AACCATAACTGATTTAATGAGCCATTCG 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394519391772604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |