Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_010105.1
Length=170523
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 196 5e-45
seq509673 122 9e-23
>seq449735
Length=3187
Score = 196 bits (216), Expect = 5e-45
Identities = 487/733 (66%), Gaps = 11/733 (2%)
Strand=Plus/Minus
Query 141611 TAGTCGGGATAGCAATTTCACAACACAGGTTACTCTGGCGAATAGGAGCCTTTTCACGAA 141670
|||| || | |||||||| |||| | ||| ||||||||||| ||| || | ||
Sbjct 754 TAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCAA 695
Query 141671 TAAATGGTGTGAAGTTGTTAGTGTTATCAACGAACTGAGGATAAATTCGTGCAGTGCCTG 141730
| || || || | ||| || |||||| || ||||| || | || | ||
Sbjct 694 TGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTTG 635
Query 141731 AACGTTCGGTCATAAACAATTCGAAGAGGTCGCGTGCTTTAATACGTTTCTTACGAATAC 141790
|||||| | ||||| | ||| || || |||||||| ||||| ||||||||
Sbjct 634 CACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTG 575
Query 141791 TAGAGTCTTTTTCAGCAGCTTCATACAATTCACGGAAACGT--TCTTGGTCTTCAAAATA 141848
||||| ||| | | || | | || | || || | ||||||||||||||| |
Sbjct 574 ATTCGTCTTGTTC-GTATTTT-ACATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAA 517
Query 141849 AGAATAATAAAGCTCGCCGCCCATTTCATGAGGACTAAACAGGGTAATGTAATCATTTTT 141908
| || ||||| ||| || ||| || ||||||| ||||||||| || | |||
Sbjct 516 TGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTT 460
Query 141909 ACCGAAACGTTCCATCATCAGGTCGTTTAACTGGATTCCGTAGTCCATATGACGAATACG 141968
| ||||| ||| || | || ||||| | ||||| || | |||||| | ||
Sbjct 459 AATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCG 400
Query 141969 GTTCTCATCGACACCTTTGTTGTTTTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCA 142028
||| ||||| || || ||| ||||| | || | ||| ||||| ||||| ||||||||
Sbjct 399 GTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCA 340
Query 142029 AATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTA 142086
|| || || | ||| || || ||||||||||| | || ||||| ||||| ||||
Sbjct 339 AAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTA 282
Query 142087 ACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATG 142146
|| || || || || || || | || |||||| ||| ||||| | |||| || ||
Sbjct 281 ACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTG 222
Query 142147 CCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTA 142206
| ||| | ||| |||||||| ||| |||| || ||||| || |||||||
Sbjct 221 CGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGC 162
Query 142207 GAAATGTATTCAATTATTGAGTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCT 142266
|| | ||||| || |||| | || |||||| || | || ||||||
Sbjct 161 GATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACAC 102
Query 142267 TCAATAACCACACAAGAACTAAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGA 142326
|| || | ||||| || ||||| || || ||||| ||||| |||| |||||||| ||
Sbjct 101 TCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGC 42
Query 142327 GTAGGCAACGAAA 142339
||||| | ||||
Sbjct 41 GTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 122 bits (134), Expect = 9e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 141934 TTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTTT 141993
|||||||| | ||||| ||||||||||| | |||||| || || || || ||| |||
Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281
Query 141994 TTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142053
|||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341
Query 142054 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 142113
|||||||||| || |||||||| || ||||||||||||| ||||| |||| |||||
Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401
Query 142114 GGAATAACACCGGTATG 142130
|| ||| ||| |||||
Sbjct 402 GGGATACAACCCGTATG 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541962033701360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |