Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq449735 196 5e-45 seq509673 122 9e-23 >seq449735 Length=3187 Score = 196 bits (216), Expect = 5e-45 Identities = 487/733 (66%), Gaps = 11/733 (2%) Strand=Plus/Minus Query 141611 TAGTCGGGATAGCAATTTCACAACACAGGTTACTCTGGCGAATAGGAGCCTTTTCACGAA 141670 |||| || | |||||||| |||| | ||| ||||||||||| ||| || | || Sbjct 754 TAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCAA 695 Query 141671 TAAATGGTGTGAAGTTGTTAGTGTTATCAACGAACTGAGGATAAATTCGTGCAGTGCCTG 141730 | || || || | ||| || |||||| || ||||| || | || | || Sbjct 694 TGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTTG 635 Query 141731 AACGTTCGGTCATAAACAATTCGAAGAGGTCGCGTGCTTTAATACGTTTCTTACGAATAC 141790 |||||| | ||||| | ||| || || |||||||| ||||| |||||||| Sbjct 634 CACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTG 575 Query 141791 TAGAGTCTTTTTCAGCAGCTTCATACAATTCACGGAAACGT--TCTTGGTCTTCAAAATA 141848 ||||| ||| | | || | | || | || || | ||||||||||||||| | Sbjct 574 ATTCGTCTTGTTC-GTATTTT-ACATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAA 517 Query 141849 AGAATAATAAAGCTCGCCGCCCATTTCATGAGGACTAAACAGGGTAATGTAATCATTTTT 141908 | || ||||| ||| || ||| || ||||||| ||||||||| || | ||| Sbjct 516 TGCATCGTAAAG---GCCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTT 460 Query 141909 ACCGAAACGTTCCATCATCAGGTCGTTTAACTGGATTCCGTAGTCCATATGACGAATACG 141968 | ||||| ||| || | || ||||| | ||||| || | |||||| | || Sbjct 459 AATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCG 400 Query 141969 GTTCTCATCGACACCTTTGTTGTTTTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCA 142028 ||| ||||| || || ||| ||||| | || | ||| ||||| ||||| |||||||| Sbjct 399 GTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCA 340 Query 142029 AATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTA 142086 || || || | ||| || || ||||||||||| | || ||||| ||||| |||| Sbjct 339 AAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTA 282 Query 142087 ACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATG 142146 || || || || || || || | || |||||| ||| ||||| | |||| || || Sbjct 281 ACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTG 222 Query 142147 CCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTA 142206 | ||| | ||| |||||||| ||| |||| || ||||| || ||||||| Sbjct 221 CGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGC 162 Query 142207 GAAATGTATTCAATTATTGAGTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCT 142266 || | ||||| || |||| | || |||||| || | || |||||| Sbjct 161 GATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACAC 102 Query 142267 TCAATAACCACACAAGAACTAAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGA 142326 || || | ||||| || ||||| || || ||||| ||||| |||| |||||||| || Sbjct 101 TCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGC 42 Query 142327 GTAGGCAACGAAA 142339 ||||| | |||| Sbjct 41 GTAGGTAGTGAAA 29 >seq509673 Length=441 Score = 122 bits (134), Expect = 9e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 141934 TTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTTT 141993 |||||||| | ||||| ||||||||||| | |||||| || || || || ||| ||| Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281 Query 141994 TTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142053 |||| || | | |||||||| |||||||| | || ||| | || || || Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341 Query 142054 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 142113 |||||||||| || |||||||| || ||||||||||||| ||||| |||| ||||| Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401 Query 142114 GGAATAACACCGGTATG 142130 || ||| ||| ||||| Sbjct 402 GGGATACAACCCGTATG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541962033701360