Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 206 3e-48
seq496362 100 3e-16
seq54337 95.1 1e-14
seq231358 93.3 5e-14
seq504380 89.7 6e-13
>seq44246
Length=4029
Score = 206 bits (228), Expect = 3e-48
Identities = 897/1395 (64%), Gaps = 53/1395 (4%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| ||||||||||||
Sbjct 1723 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 1664
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| |||||||| || |||| || |||||||| | | || | | || |||
Sbjct 1663 GCCGTGGGCATCGGGGCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTCTCC 1604
Query 114062 TTGAGGGCGTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115
|| || | |||||| || | || || | |||||| |||| || ||
Sbjct 1603 TTCAGCAGCTTCCAGTCCCACAGGTCGGTGGGCGTCTTCTCCC------ACATGTCGTAC 1550
Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175
|||||||| || | | | | || || || || | || ||||| |||||| | |
Sbjct 1549 TGGAGGATGCCCTTGCTGACGGGGGAGCC-TCGTACGTGTCGTAGGGGCCCAGCTCGGCG 1491
Query 114176 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235
|||| |||| |||| ||||| ||||| |||| || || |||||||| || | |||
Sbjct 1490 GCCAGTTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTC 1431
Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295
| || ||||||| | ||||| | | || || || || | || || ||
Sbjct 1430 AGCAGCTGGGCCTCGGGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAGG 1371
Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352
|| ||||| |||| || || || | || | | | || |||| || ||| ||| |
Sbjct 1370 CCCTGGACGCCGATACCGATCGGCCTGTGGCGCTTGTTGGACT---GATCGGCCTCGGGC 1314
Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412
|| || || || || | || || | | | || || || || || || || || |
Sbjct 1313 ACCGGGTAGAAGTTAATCTCTATGATCTTGTTCAGGTTCTTCACGATCACTTTGGTCACA 1254
Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 114472
| || || | | | |||||| | || ||| |||| ||| | || |||
Sbjct 1253 GACTCCAGTTTCTTGAAGTCAAAAGTCCG---CTCGGGGGTGACGTACATGTTGAGAGCG 1197
Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532
|| || |||||||||||||||| | |||||| | | ||| || | ||||||||
Sbjct 1196 ATGGAGGCCAGATTACACACAGCGACCTCATCGCCACTGGAGTATTCAACGATTTCCGTG 1137
Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592
|| | || | ||| ||||| |||| ||||| || || ||| |||| || ||
Sbjct 1136 CAGAGGTTGCTGCACTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 1077
Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652
|| ||||| |||||||| ||||| |||| |||||| ||||||| || || || | |||
Sbjct 1076 TCTTTGTACAGCATGTACGGCGTGCCCGACTCCGTCTGGGACTCGATGATGGCGTGCCAC 1017
Query 114653 ACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711
|| | | | | || || || ||| | || |||||| ||| || | ||||||||
Sbjct 1016 ACCTGCTGAGCCTTCACCACACGC-TTGACCCGGCCCTCCCGCTCATATTGGGTGTAGAG 958
Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGA 114770
|||||||| || ||| | ||| ||||| || || | ||||| || | |
Sbjct 957 CTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCC-GGGGCTCTCGCTGGGACACATCA 899
Query 114771 GAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828
||||||| | || | ||| || | ||||||||| ||||| |||||||| | |||
Sbjct 898 GAGACCA--GTCCTGGTTGCTCTCCACCCTCTTCATGAACAGGTCGGGGATCCACA-AGC 842
Query 114829 TG-AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 114886
| |||||||||| | | | ||| || | ||||| || || || |||||
Sbjct 841 CGTAGAAGAGATCTCTGGCTCTCTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGG 783
Query 114887 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTA 114940
||||| | | || ||||||||| |||||||||| |||| | || |||
Sbjct 782 AAGTCGAACACGTCAAAGTGCCACGGCTCCAGGTACATGGCGAAGGCGCCGGGTCGCTT- 724
Query 114941 CGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000
| | || |||||| ||||| | |||||| || | || | ||||| || |
Sbjct 723 -GTTG-CCGCCCTGGTCGACATAGCGTGCTGTGTTGTTGTAGACCCTCAGCATGGGGACC 666
Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCAT 115058
| || | || | ||| || || || || | ||| || || || |
Sbjct 665 AGCCCGTTGGAGTTGCCGTTGGTGCCGGCGATGTAGCTCCCGGTGGATCGGATGCAGC-- 608
Query 115059 GGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGC 115118
|| | || ||| || || |||||| |||| ||||| | || |||| | | || ||
Sbjct 607 TGACGGCCACACCGATTCCTCCTGCCGACTTGGAGATGAGTGCACACTGCTTCAGCGTGT 548
Query 115119 CGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTG 115178
||||||| || ||||| ||| |||| | | || ||||||||||| || | || |
Sbjct 547 CGTAGATGCCCTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAGAGCTGAG 488
Query 115179 GCC--TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGG 115235
||| ||| || || ||||||||||| || || | |||||| ||||| || | | |
Sbjct 487 GCCGGTTG--GTTCCTGCGTTGAAGAGCGTGGGGGAGGCGTGGGTGAAC-CACTTCTCCG 431
Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295
| | | | ||||||||| | | ||||| || || | ||| || |||| ||| |
Sbjct 430 AGAGCAGGTTGTAGGTCTCGATGGCGGCGTCGATATCCGTCTTGTGGATTCCGACCGACA 371
Query 115296 CCCGCATAAACATGT 115310
||| ||| | |||||
Sbjct 370 CCCTCATGAGCATGT 356
>seq496362
Length=882
Score = 100 bits (110), Expect = 3e-16
Identities = 112/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| | ||| |||||||| || || | ||| || ||||| || ||||||||| | |||
Sbjct 619 GTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCCTGGCATCAAACC 560
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|| || |||||||||||||| | |||||| | ||| |||||||| ||||| |||||
Sbjct 559 TCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAATTCCTTCCACTGC 500
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
|| || |||| | ||||| || || ||
Sbjct 499 TGCAAAAGCAATCAATCGCTCTGCGAAAGA 470
>seq54337
Length=1748
Score = 95.1 bits (104), Expect = 1e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| ||| | ||||| ||||||| | |||||||||| |||| ||| ||||| |||||
Sbjct 1338 TAGATGTTGCTGGTGTACGGCTCAATGGACTCATTGTTGCCCAGGATCTGGGCAGTGGAA 1279
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033
|||||||||||||| |||| || || |||||
Sbjct 1278 GCTGTGGGCATGGGGGCCAACAGCAGACTGTT 1247
>seq231358
Length=2322
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
||||||| | | |||||| ||||| |||||| ||| || ||||| || || | |||||
Sbjct 628 CCTCGTCTCTGCTGATGAGCTCATTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 687
Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174
||| |||||| || ||| || || || ||||||||||||||||||||
Sbjct 688 TCAGCCAGAAGATGGCAGCGAAGGACCCAGAGAAGAAGATTCCCTCCAC 736
>seq504380
Length=601
Score = 89.7 bits (98), Expect = 6e-13
Identities = 218/325 (67%), Gaps = 14/325 (4%)
Strand=Plus/Plus
Query 10874 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGC- 10932
||||| |||||||| || ||| | ||| || | || || || || |||||||| |
Sbjct 14 TCAAAACCATCCATTTCGACCAATAATTGGTTCAGTGTCTGCTCACGCTCATCATTACCA 73
Query 10933 --GGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 10990
| ||||||| ||| | || |||||| || ||||||||||| || || | |
Sbjct 74 CCGCCCATACCAGAGCCAC---GATGACGACCGACCGCATCAATTTCATCAATAAAGATG 130
Query 10991 ATACACGGTTGA---TTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCG 11047
||||| || |||| | || ||| || ||||| || || | |||||||
Sbjct 131 ATACAAGGCGCGCTCTTTTTA---GCCTGTTCGAACATATCGCGTACACGTGAGGCACCG 187
Query 11048 ACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGA 11106
||||| |||||||| || ||||||| | | | | |||| || ||| || || || |
Sbjct 188 ACACCGACAAACATCTCAACAAAATCAGAACCTG-AGATTGAGAAGAACGGCACTTTAGC 246
Query 11107 TTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAG 11166
|||||| || ||||||| ||| | | ||| || || || || || ||| | | |
Sbjct 247 TTCACCAGCAATGGCTCTGGCTAACAAGGTTTTACCGGTACCTGGAGGACCTACCATTAA 306
Query 11167 GGCACCACGTGGGATCCTGGCACCA 11191
| ||||||||| ||| | ||||||
Sbjct 307 GATACCACGTGGAATCGTCGCACCA 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593429718606160
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