Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq76095 89.7 6e-13
seq331091 86.0 7e-12
seq150316 86.0 7e-12
seq469902 84.2 2e-11
seq58530 84.2 2e-11
seq64090 82.4 8e-11
>seq76095
Length=1076
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
|| |||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||
Sbjct 440 ATATTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 381
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 380 CACTATACTAACGAGGA 364
>seq331091
Length=722
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 333 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 392
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 393 TACTAACGAGGA 404
>seq150316
Length=2093
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 159 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 100
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 99 TACTAACGAGGA 88
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 471 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 412
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 411 TACTAACGAGGA 400
>seq469902
Length=392
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/89 (81%), Gaps = 4/89 (4%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |
Sbjct 309 ATTGTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATC 250
Query 57062 CACTATACTACCGAGGATTGAATATATAA 57090
|||||||||| |||| ||||||||||
Sbjct 249 CACTATACTAACGAG----GAATATATAA 225
>seq58530
Length=1305
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|||||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||
Sbjct 928 TTTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCC 987
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 988 ACTATACTAACGAGGA 1003
>seq64090
Length=4476
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||
Sbjct 4304 TTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTATCCA 4245
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 4244 CTATACTAACGAGGA 4230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539644557339680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |