Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_010583.1
Length=111382
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 219 3e-52
seq507483 140 2e-28
seq435060 132 3e-26
seq506238 98.7 7e-16
seq510012 96.9 2e-15
seq508595 89.7 4e-13
seq484804 87.8 1e-12
>seq426744
Length=341
Score = 219 bits (242), Expect = 3e-52
Identities = 240/313 (77%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 102061 ATTAAGCGGCAGCGTAAGCACCAGATACAACGCCGTT--CTCGAAGTA-ACGTTGCAGGT 102117
|||| || || ||||| | ||||| || | || || || || | |||||| ||||
Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88
Query 102118 TAACACGCTGAGTAACGTAGTATGCGTCACGCTGTTTGCCAGCTTGGCGCTCACGTTCAA 102177
||| ||| ||||| ||||||||||| ||||| || || |||||||| ||||||||||| |
Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148
Query 102178 CAGTAACAGCACGCTGACGCGGCATTACGAAGTTATCTTTATAAACAATAACTGCGAATT 102237
| |||| || ||| ||||| || | |||||||| || ||||| ||| |||||
Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208
Query 102238 CTGCAGAAGCAGCTTTAGCTGGGAAATACTCAGAAACTACAACCGGCAGACCGTAAATAC 102297
||| | |||||||||||||||| || | |||||||| ||| | |||||||| ||||
Sbjct 209 CTGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATAC 268
Query 102298 GACCAACCTGACCTTGCAG-TTTAAC-AG-CATCGTTACCAACCTGGGCAACATCCTGCC 102354
||||||| || ||||| || |||||| || ||| |||||| ||| |||||||||||
Sbjct 269 GACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGCC 328
Query 102355 ATTCTTCATCTTC 102367
|||||||||||||
Sbjct 329 ATTCTTCATCTTC 341
>seq507483
Length=1083
Score = 140 bits (154), Expect = 2e-28
Identities = 415/629 (66%), Gaps = 16/629 (3%)
Strand=Plus/Plus
Query 74852 CATTGATGCAGATGGTTGCATT--CGTACTGGTTTCCATGAACACATGACTACTTCTGGT 74909
|||||| ||||||| |||| ||||| || || |||||| ||| ||||| |||
Sbjct 371 CATTGACCGAGATGGT--CATTTACGTACAGGGTTTAGCCAACACACGACCACTTCGGGT 428
Query 74910 CGTCTGAGTTCTTCTGGTAAGCTGAACCTGCAACAGTTACCACGTGATGAATCTATTATC 74969
||||| ||||| || || || || ||| | || || | || |||||||| |||| |
Sbjct 429 CGTCTAAGTTCATCAGGCAAACTTAACTTACAGCAACTTCCTCGTGATGATGCTATGGTT 488
Query 74970 AAGGGTTGTGTAGTAGCTCCCCCTGGATATCGTGTAATCGCATGGGACTTAACAACTGCG 75029
||||| ||| | |||||||| | || ||| | ||| | || ||| | |||||||
Sbjct 489 AAGGGATGTATTGTAGCTCCTGCGGGCTATAGAGTAGTAGCCGTGGATATGGAAACTGCG 548
Query 75030 GAAGTTTATTACGCTGCTGTACTGTCTGGTGACAGAA-ACATGCAACAAGTATTT-ATCA 75087
||| | | || || | ||| ||| || | || || | || |||| ||| | |
Sbjct 549 GAAATGTGGGTAGCAGCAGCACTTAGTGGGGATAAAAGACCTACAGAAAGTGTTTTAACG 608
Query 75088 ACATGAAGAATGAGCCAGATAAATATCCTGACTTCCACTCAAACATCGCACACATGGTAT 75147
| ||| | || | | || | | ||||||||| || ||||||||||| |
Sbjct 609 ATATGGCTGACAAGTCTATTGTATCTGCCGACTTCCACAGCTCTATTGCACACATGGTGT 668
Query 75148 TTAAACTGACCTGTGAACCGCGTGATGTTAAGAAGT-TGTTCCCAGCTCTGCGTCAGGCT 75206
| || | | |||| | ||| ||| |||| | | ||||||| || | |||||||||
Sbjct 669 TCAAGCCAAACTGTCTAGCGCATGA-ATTAAAAGCTATGTTCCCTGCATTACGTCAGGCT 727
Query 75207 GCTAAGGCAATTACCTTCGGTATTCTGTACGGTTCTGGCCCAGCTAAAGTAGCTCATTCT 75266
|||| || ||| | ||||||||||| | |||| ||| |||||||| ||||| | |||
Sbjct 728 TCTAAAGCTATTTCATTCGGTATTCTATTCGGTAGTGGACCAGCTAAGGTAGCAGAATCT 787
Query 75267 GTTAACGAAGCTCTTCTGGAACAGGCCGCTAAGACAGGCGAACCGTTTGTTGAATGTACC 75326
|||| || | || | || || | ||||| || || | ||| ||
Sbjct 788 ATTAATGAGTCGCTATTTGAGCAACATGTAAAGACGGGTTGCCC---TTACGAACCTATT 844
Query 75327 GTTGCAGA---TGCGAAGGACTATATCGAAACTTACTTCGGTCAATTCCCTCAGCTTAAG 75383
| | ||| || || || || || || |||||| ||| |||||| | || ||
Sbjct 845 GATAAAGAAACAGCTAAAGATTACATTGATGTTTACTTTAGTCGTTTCCCTGACCTGAAA 904
Query 75384 CGTTGGATTGATAAGTGCCACGATCAGA-TCAAGAACTTTGGATTCATCTACAGTCACTT 75442
||||||||||| || ||| || |||| || | | | ||| || || || || |||||
Sbjct 905 CGTTGGATTGACGCGTCCCATGAGCAGATTCTACAGC-ATGGGTTTATTTATAGCCACTT 963
Query 75443 TGGTCGTAAGCGTCGTCTGCACAATATCC 75471
|| ||||| ||| | || | |||||||
Sbjct 964 CGGACGTAAACGTAGACTACGTAATATCC 992
>seq435060
Length=507
Score = 132 bits (146), Expect = 3e-26
Identities = 300/446 (67%), Gaps = 25/446 (6%)
Strand=Plus/Plus
Query 75108 AAATATCCTGACTTCCACTCAAACATCGCACACATGGTATTTAAACTGACCTGTGAACCG 75167
|| ||||| ||||||||| ||||| || |||||||| ||||| || | ||| | ||
Sbjct 44 AAGTATCCCGACTTCCACAGTAACATAGCTCACATGGTGTTTAACCTACCTTGTAAGCCT 103
Query 75168 CGTGATGTTAAGAAGTTGTTCCCAGCTCTGCGTCAGGCTGCTAAGGCAATTACCTTCGGT 75227
|| |||||||| | |||||||| || | |||||||| ||||| || || || |||
Sbjct 104 GAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGGCTGCGAAGGCGATAACATTTGGT 163
Query 75228 ATTCTGTACGGTTCTGGCCCAGCTAAAGTAGCTCATTCTGTTAACGAAGCTCTTCTGGAA 75287
||||| | |||||| || |||| ||||| | |||||| |||| || |||
Sbjct 164 ATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGCAAGTTAACTTAGCTAAGCTAGAA 223
Query 75288 CAGGCCGCTAAGACAGGCGAACCGTTTGTTGAATGTACCGTTGCAGATGC-GAAGGACTA 75346
||| ||| | | ||| ||||| | | || | ||| ||
Sbjct 224 TT------------AGGTGAAGCA---GCTGATTGTACTAAAGAAATCGCCGCAGGT-TA 267
Query 75347 TATCGAAACTTACTTCGGTCAATTCCCTCAGCTTAA-GCGTTGGATTGATAAGTGCCACG 75405
|||||| |||||| | |||||| ||||| |||| |||||||| || || |
Sbjct 268 CATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAGCGT-GGATTGATTCTTGTCATG 326
Query 75406 ATCAGATCA---AGAACTTTGGATTCATCTACAGTCACTTTGGTCGTAAGCGTCGTCTGC 75462
|| | ||| |||| ||||| || |||| ||||| || ||||||||| | | |
Sbjct 327 ATGAAATCCGTCAGAAA---GGATTTATATACAACCACTTCGGCCGTAAGCGTAGATTAC 383
Query 75463 ACAATATCCATTCTGAAGATCGTGGTGTTCAGGGTGAGGAAATCCGTTCTGGATTTAACG 75522
|||| ||| |||| ||| | || ||| |||| ||||||||||| |||||||| |
Sbjct 384 ACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGAGAAATCCGTTCAGGATTTAATG 443
Query 75523 CAATCATTCAGTCTGCATCTTCGGAT 75548
| ||||| |||||||| || || |||
Sbjct 444 CTATCATACAGTCTGCGTCATCTGAT 469
>seq506238
Length=275
Score = 98.7 bits (108), Expect = 7e-16
Identities = 126/172 (73%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 29172 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCGAACA 29231
||||||||||| | | ||||| | ||||||||| | || | || ||||| || ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 29232 GCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGCATC- 29290
|| || || || |||||||| || || || || ||||||||||| ||||| |||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 29291 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 29341
| || | | ||||||| ||||||||| || |||| || ||||| || ||
Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq510012
Length=1165
Score = 96.9 bits (106), Expect = 2e-15
Identities = 147/203 (72%), Gaps = 10/203 (5%)
Strand=Plus/Minus
Query 40559 ATCAACTTCACAATACGTTCGGCCATATTCTTTTACCCACGAAGTGTTGTATAGCTTCGC 40618
||||||||||||||| | || ||||| |||| || ||| ||||||||| ||| || ||
Sbjct 1114 ATCAACTTCACAATAGTTACGACCATACTCTTCTA-CCAAGAAGTGTTGAATACTTTGGC 1056
Query 40619 AAGGTATTTTGTTAAAGTAGTCTTT---CCTGAGCTTTCAGTCCCAATGATTACAACCTT 40675
||||| ||||| | ||| ||||| | ||| ||||| |||||||| ||| ||||
Sbjct 1055 GAGGTACTTTGTAAGGGTACTCTTTGCACTTGA---CTCAGTACCAATGATAACAGCCTT 999
Query 40676 ACGCACGTAATCTTTACGAACTACGCTAGG-AAGAAACTCCCAATACTTCATA-AGATCA 40733
|| | | |||||||| |||| ||| | | ||| ||| ||||| ||| ||
Sbjct 998 TAACAAGAACTCTTTACGGACTAGAGAAGGTAGGTTACTGCCAGTACTT-ATAGGGAGAC 940
Query 40734 TTACGAATCATTGTAGCTGAGAT 40756
| ||| ||| ||||||| |||||
Sbjct 939 TGACGTATCTTTGTAGCAGAGAT 917
>seq508595
Length=419
Score = 89.7 bits (98), Expect = 4e-13
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 31012 TGGTGCGGGATACGAGAGTCGAACTCGTGTCTACTGGTTGGAAGCCAGTTATTCTAGCCA 31071
|||||||| || |||| |||||||| |||||||| |||||||||||||||||| |||
Sbjct 354 TGGTGCGGAATTAGAGATTCGAACTCTAATCTACTGGGTGGAAGCCAGTTATTCTA-CCA 296
Query 31072 CTGAACTAATCACGCATAA 31090
|||||||||| |||||||
Sbjct 295 TTGAACTAATCCCGCATAA 277
>seq484804
Length=980
Score = 87.8 bits (96), Expect = 1e-12
Identities = 245/365 (67%), Gaps = 17/365 (5%)
Strand=Plus/Plus
Query 51109 AATTTCTC--CACGATCGTCAATCCCTCTT---TTCAAATTATGATAGACTTTGGCTAAC 51163
||| |||| | ||||| ||||| ||| || ||||| |||| | | ||| | |
Sbjct 4 AATATCTCAGCGCGATCATCAATACCTTTTGGATTCAAGTTATCAACAATTTTTTTCAGC 63
Query 51164 TGATCAAA--TACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACTC 51221
|| |||| ||||| ||||||| |||| ||| ||| ||||||| || || || |
Sbjct 64 TGGTCAATGCTACCA--CCATCAGGCTTAGCCCATGCACGGCCTTGAATCCCGTAAACGC 121
Query 51222 GTCCCATATCATCCTCGCCTTTACG--GAATGGATTACCTAGCCAGGCAATATTTTCATT 51279
| ||||||||||| || ||||| || ||||| ||| ||||| ||| |||| |||
Sbjct 122 GCCCCATATCATCTTCACCTTTGCGGTGAATG--TTATTAAGCCAAGCATCATTTAAATT 179
Query 51280 TGCATTAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCC 51339
|||||||||| ||| || ||| ||| | || || | || || ||| || ||
Sbjct 180 GGCATTAGCATCCCAGGTTTTAGTACCTAGTTTACGAAAATCAGCGGCATTGTCATAACC 239
Query 51340 ACGGAGATATCCGATCATTTCCATTATTGCTTGTTTAGCAAATGCT-TTACGAGTAGTTA 51398
||||| ||| || || | || || || || | | ||| ||| ||||| |||||||
Sbjct 240 ACGGATATAACCAATAAACTCAGCAATCGC-TGACTTGAAAAAGCTCTTACGCGTAGTTA 298
Query 51399 CTAGCGGCAGTTCTCCTGCTCCTACGTT-AAAGGTAAAGTCTGCATCAATAATGGTTAGG 51457
|| || | || || || || || | ||||| || |||| ||| | |||||
Sbjct 299 TTAATGGAAACTCGTTAGCACCAACATTGTATTGTAAA-TCAGCATTAATGACGGTTAAA 357
Query 51458 CAACG 51462
|||||
Sbjct 358 CAACG 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354015672201746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |