Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011040.1 Length=39816 Score E Sequences producing significant alignments: (Bits) Value seq512931 190 5e-44 >seq512931 Length=538 Score = 190 bits (210), Expect = 5e-44 Identities = 375/541 (69%), Gaps = 44/541 (8%) Strand=Plus/Plus Query 37627 CCCGACCACTCACCTTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TGACTGGTAGTCG 37685 || |||||| || || |||||||| |||||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37686 TGCTGACATCATTATCGCAGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGCTCTGC 37745 |||||||||| | || || |||||||||||||| ||||||||| | ||| || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37746 TCGTGAGAAGCTGTGGACA-CTGGTAACTGAGTTTGCTGCGTTACTTAAGCCGTTACCTA 37804 | || | || ||| | ||||||| || || | |||| | || ||||| | || Sbjct 129 AAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC-TGACGGT 186 Query 37805 CCTCTCGCGTTATCTACCTTGGGACACCTCAAACCGAGATGACTCTCTATAAGGAACTTG 37864 | || |||||| | || || || || ||||| ||||| ||||| | |||||||| Sbjct 187 ACGATC-----ATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 37865 AGGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCACGCAATGACGCTG 37924 |||| | || ||| || |||||||| |||| || || || ||| |||| Sbjct 242 AGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298 Query 37925 A----GGCTCTCTACT---------ATGGCGACCGA------CTGGCTCCTA---TGCTT 37962 | | || ||||| | ||| | || |||| | || |||| Sbjct 299 ACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357 Query 37963 AAGCAAGAGTATGATGAAGGCTACGAGATTCT-TCGTGGACAACCTACTGACCCTATTCG 38021 ||| ||| || |||| | |||||| || | |||| | ||||| ||||||||||| Sbjct 358 AAG---GAGC-TG--GAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCG 410 Query 38022 ATTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTACACTCT 38081 ||||||| || ||||| ||||| || |||||| ||||||||| | ||||| | |||| Sbjct 411 ATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCT 470 Query 38082 TCAGTTCATGCTCAACCCTAACCTGTCCGATGCTGAGAAGTACCCGCTGAGGCTCCGTGA 38141 ||||||||||||||||| ||||| ||| |||||||||||| ||| ||| ||||| Sbjct 471 ACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Query 38142 T 38142 | Sbjct 531 T 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126495270094872