Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_011040.1
Length=39816
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 190 5e-44
>seq512931
Length=538
Score = 190 bits (210), Expect = 5e-44
Identities = 375/541 (69%), Gaps = 44/541 (8%)
Strand=Plus/Plus
Query 37627 CCCGACCACTCACCTTCTGTGAAGTCTGTGGGTATCACTGGTCAGT-TGACTGGTAGTCG 37685
|| |||||| || || |||||||| |||||| | ||||| | || |||||||||| ||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 37686 TGCTGACATCATTATCGCAGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGCTCTGC 37745
|||||||||| | || || |||||||||||||| ||||||||| | ||| || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 37746 TCGTGAGAAGCTGTGGACA-CTGGTAACTGAGTTTGCTGCGTTACTTAAGCCGTTACCTA 37804
| || | || ||| | ||||||| || || | |||| | || ||||| | ||
Sbjct 129 AAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC-TGACGGT 186
Query 37805 CCTCTCGCGTTATCTACCTTGGGACACCTCAAACCGAGATGACTCTCTATAAGGAACTTG 37864
| || |||||| | || || || || ||||| ||||| ||||| | ||||||||
Sbjct 187 ACGATC-----ATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241
Query 37865 AGGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCACGCAATGACGCTG 37924
|||| | || ||| || |||||||| |||| || || || ||| ||||
Sbjct 242 AGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298
Query 37925 A----GGCTCTCTACT---------ATGGCGACCGA------CTGGCTCCTA---TGCTT 37962
| | || ||||| | ||| | || |||| | || ||||
Sbjct 299 ACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357
Query 37963 AAGCAAGAGTATGATGAAGGCTACGAGATTCT-TCGTGGACAACCTACTGACCCTATTCG 38021
||| ||| || |||| | |||||| || | |||| | ||||| |||||||||||
Sbjct 358 AAG---GAGC-TG--GAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCG 410
Query 38022 ATTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTACACTCT 38081
||||||| || ||||| ||||| || |||||| ||||||||| | ||||| | ||||
Sbjct 411 ATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCT 470
Query 38082 TCAGTTCATGCTCAACCCTAACCTGTCCGATGCTGAGAAGTACCCGCTGAGGCTCCGTGA 38141
||||||||||||||||| ||||| ||| |||||||||||| ||| ||| |||||
Sbjct 471 ACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530
Query 38142 T 38142
|
Sbjct 531 T 531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126495270094872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |