Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011042.1 Length=39252 Score E Sequences producing significant alignments: (Bits) Value seq512931 235 1e-57 >seq512931 Length=538 Score = 235 bits (260), Expect = 1e-57 Identities = 370/528 (70%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 37043 CCAGACCACTCACCTTCGGTTAAGTCCGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 37101 || |||||| || ||||| |||||||| ||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37102 TGCTGACATCCTGATTGCCGATGACGTGGAGGTTCCTAACAACTCAGCGACTCAGGCTGC 37161 |||||||||||| ||||| |||||||| ||||| || |||||| | || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37162 ACGAGACCGTCTGTCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 37221 | | || | || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 37222 AATCATCTATCTGGGTACTCCTCAGAACGAGATGACCTTGTATCGTGAGCTGGAAGGCCG 37281 |||||||| |||| || || |||| ||| |||||| | || | || || || | ||| Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 37282 TGGATACACCACTACTATCTGGCCTGCTCGTTATCCACGTGA------------TAAGAA 37329 || ||| | || || ||||||||||| || || || || || | || Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 37330 GGACTGGCAGTCTTACGGCGA------CCGTCTGGCAC---CGATGCTTCAGGCAGAGCT 37380 ||||||| | | ||| | ||||||| | | ||||| || ||||| Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365 Query 37381 GGAAGAGGACCCTGAGTCCTTCTACTGGCGTCCGACTGATGAAGTACGCTTCGATGATAC 37440 |||||| ||| ||| | | |||| || || || | || ||||||||| Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 37441 GGACCTGAAGGAACGCGAGTTGTCATATGGTAAAGCTGGCTTCGCTCTACAGTTCATGCT 37500 |||||| || ||||| | |||||||| || | |||||||||||||||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 37501 TAACCCGAACCTGAGTGATGCAGAGAAGTACCCTCTGAAGCTCCGTGA 37548 ||||||||||| || || ||||||||||| ||||||| ||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124701732653736