Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_011043.1
Length=41181
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 181 3e-41
>seq512931
Length=538
Score = 181 bits (200), Expect = 3e-41
Identities = 360/527 (68%), Gaps = 46/527 (9%)
Strand=Plus/Plus
Query 39067 CCAGACCACAGCCCGTCAGTTAAGTCTGTGGGTATTACTGGTCAGCTTACTGGTAGCCGT 39126
|| ||||||||||| || || ||||| |||||| ||||||| | ||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCCGT 69
Query 39127 GCTGATATCATCATTGCGGATGACGTGGAGATTCCCGGTAACTCTGCAACCCAAGGCGCT 39186
||||| ||| |||||||||||||||| ||| | ||||| ||||||| || || |||
Sbjct 70 GCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGCA 129
Query 39187 CGTGAGAAACTCTGGACGCTGGTTCAGGAGTTCGCCGCACTGTTGAAACCTCTGCCGACT 39246
| || | || | |||||| |||| |||| || | |||| ||| |||
Sbjct 130 AGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCT-----GACG 184
Query 39247 AGCCGTGTTATCTATCTGGGTACACCTCAGACCGAGATGACGCTCTACAAGGAACTTGAG 39306
|| | ||||| |||| || || |||||||| ||||| ||||||| ||||||||||
Sbjct 185 GTACG-ATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAG 243
Query 39307 GACAACCGTGGGTACTCCACCATTATCTGGCCTGCACAGTATCCTCGCTCCAAAGAGGAG 39366
| |||| || ||||| || | ||||||||||||| || ||||| | | ||
Sbjct 244 G---ACCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCG---GGATGTGGCT 297
Query 39367 GACCT---GTACTA-TGG--CGAC---------------CGACTGGCCC---CGATGCTC 39402
||||| || ||| ||| || | || |||| || | ||||||
Sbjct 298 GACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTC 357
Query 39403 CGTAGTGAGTACGATGAGGACAAAGAGGGCCTCAGCAGTCAGCCTACTGACCCGGTTCGA 39462
| ||| || || ||| ||| || | | ||||||| ||||| |||||
Sbjct 358 ---AAGGAGCTGGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGA 411
Query 39463 TTCGACTCCATG--GACCTTCAGGAACGTGAGGTGGAATACGGCAAGGCTGGCTATACGC 39520
||||| ||| ||||| | || || || | ||| ||||||| ||||| | |
Sbjct 412 TTCGA--TGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTC 469
Query 39521 TTCAGTTCATGCTCAACCCGAACCTCAGTGACGCCGAGAAGTACCCG 39567
| ||||||||||||||||||||||| || ||| |||||||||||||
Sbjct 470 TACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCG 516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130836012306132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |