Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011045.1 Length=38841 Score E Sequences producing significant alignments: (Bits) Value seq512931 107 5e-19 seq515320 100 7e-17 >seq512931 Length=538 Score = 107 bits (118), Expect = 5e-19 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 36625 CCAACAGACCCTGTGCGCTTCGACCGTGATGACCTCCGTGAACGTGAGTTGGAATACGGT 36684 || ||||||||| | || ||||| ||| ||||| ||||| || || | ||| || Sbjct 394 CCTACAGACCCTATTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGC 453 Query 36685 AAGGCTGGCTTCACGCTACAGTTCATGCTTAACCCGAACCTGAGTGATGCCGAGAAGTAC 36744 |||| ||||||| | |||||||||||||| ||||||||||| || || |||||||||| Sbjct 454 AAGGGTGGCTTCGCTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTAC 513 Query 36745 CCTCTGAGGCTCCGTGA 36761 || ||| ||| ||||| Sbjct 514 CCGTTGAAGCTGCGTGA 530 >seq515320 Length=237 Score = 100 bits (110), Expect = 7e-17 Identities = 128/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 11322 CTACGTGGTTCTGGCGCACTACGCCAACTATCTGATACTATTATTGCCCTTGAGCGTAAT 11381 || |||||||| || || | ||||| || |||||| |||| ||| ||||| | ||| Sbjct 16 CTTCGTGGTTCAGGTTCAATTGCTCAACTCTCAGATACTGTTATAGCCTTTGAGAGGAAT 75 Query 11382 CAGCAAGGCGATATGCCTAACCTTGTCCTCGTTCGTATTCTCAAGTGCCGCTTTACTGGC 11441 |||||||| | |||||| ||| | | | || | ||||| |||||||| || Sbjct 76 CAGCAAGGGAGCAGTCCTAACAAGGTCTTGATAAGAATCTTAAAGTGTCGCTTTACAGGT 135 Query 11442 GATA-CTGGTATTGCTGGCTACATGGAATACAACAAGGAAACAGGATGGCTTGAA 11495 || | ||||||| || |||||| || | ||||| ||||||| |||||||||||| Sbjct 136 GAAAACTGGTATAGCAGGCTACTTGAATTACAATCAGGAAACTGGATGGCTTGAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123394739943972