Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_011085.3
Length=38457
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 105 2e-18
>seq512931
Length=538
Score = 105 bits (116), Expect = 2e-18
Identities = 345/525 (66%), Gaps = 36/525 (7%)
Strand=Plus/Plus
Query 36176 TCCTGACCACT-CACCTAGTGTGAAGTCGGTAGGTATCACAGGCCAGCTTACAGGTAGCC 36234
|||||||||| | ||| | |||||||| || ||| | || ||| | || |||||||
Sbjct 9 TCCTGACCACAGCCCCTCG-GTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCC 67
Query 36235 GTGCAGACATTATCTTAGCGGATGACGTTGAGATTCCGTCTAACAGTGCTACCCAAGGTA 36294
|||| ||||| || | ||||||||||||||| | || ||| || || || ||
Sbjct 68 GTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTC 125
Query 36295 CTCGCGAGAAGTTATGGACT--CAGGTTCAGGAGTTCGCTGCGTTGTTGAAACCTCTGGA 36352
| | | || | | | | ||| |||| |||| |||| | |||| ||| |
Sbjct 126 CGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGG 185
Query 36353 TACCTCAAGGGTAATCTACTTGGGGACACCTCAGACCGAGATGACTCTCTATAAGGAACT 36412
||| | | ||||||||||| || || |||||||| ||||| ||||| | ||||||
Sbjct 186 TAC------GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACT 239
Query 36413 GGAGGATAACCGTGGTTACTCTACCATTATCTGGCCTGCCTATTATCCTCGCAACAAAGA 36472
||||| ||| || ||||| || | ||||||||||| || ||||| | |
Sbjct 240 TGAGGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGC 296
Query 36473 GGAGGCTATGCACTACGGTGACC-----GTCTTGCGCCTATG-------CTTA--AGGCT 36518
|| | | |||| | || | | |||| | | |||| | |||
Sbjct 297 TGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCT 356
Query 36519 GAGTATGATG--AGAC-ACCAGAA-CTCCTAGCTGGGACTCCTACAGACCCTGTACGGTT 36574
| | || |||| || |||| || | |||| | |||||||||||| | || ||
Sbjct 357 CAAGGAGCTGGAAGACGACGAGAAGCTGTT--CTGGAAG-CCTACAGACCCTATTCGATT 413
Query 36575 CGATAAGGAAGACTTGCTGGAGCGTGAGTTAGAGTACGGTAAGGCTGACTTCACTTTACA 36634
|||| | |||||| ||| ||||| || | || || |||| || |||| || ||||
Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473
Query 36635 GTTCATGCTTAACCCTAACCTCAGTGACGCCGCTAAGTACCCTTT 36679
||||||||| ||||| ||||| || ||| || |||||||| ||
Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122173608069156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |