Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011085.3 Length=38457 Score E Sequences producing significant alignments: (Bits) Value seq512931 105 2e-18 >seq512931 Length=538 Score = 105 bits (116), Expect = 2e-18 Identities = 345/525 (66%), Gaps = 36/525 (7%) Strand=Plus/Plus Query 36176 TCCTGACCACT-CACCTAGTGTGAAGTCGGTAGGTATCACAGGCCAGCTTACAGGTAGCC 36234 |||||||||| | ||| | |||||||| || ||| | || ||| | || ||||||| Sbjct 9 TCCTGACCACAGCCCCTCG-GTGAAGTCCGTGGGTGTTACTGGCGGTATGACTGGTAGCC 67 Query 36235 GTGCAGACATTATCTTAGCGGATGACGTTGAGATTCCGTCTAACAGTGCTACCCAAGGTA 36294 |||| ||||| || | ||||||||||||||| | || ||| || || || || Sbjct 68 GTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACA--GTC 125 Query 36295 CTCGCGAGAAGTTATGGACT--CAGGTTCAGGAGTTCGCTGCGTTGTTGAAACCTCTGGA 36352 | | | || | | | | ||| |||| |||| |||| | |||| ||| | Sbjct 126 CGCAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGG 185 Query 36353 TACCTCAAGGGTAATCTACTTGGGGACACCTCAGACCGAGATGACTCTCTATAAGGAACT 36412 ||| | | ||||||||||| || || |||||||| ||||| ||||| | |||||| Sbjct 186 TAC------GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACT 239 Query 36413 GGAGGATAACCGTGGTTACTCTACCATTATCTGGCCTGCCTATTATCCTCGCAACAAAGA 36472 ||||| ||| || ||||| || | ||||||||||| || ||||| | | Sbjct 240 TGAGGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGC 296 Query 36473 GGAGGCTATGCACTACGGTGACC-----GTCTTGCGCCTATG-------CTTA--AGGCT 36518 || | | |||| | || | | |||| | | |||| | ||| Sbjct 297 TGACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCT 356 Query 36519 GAGTATGATG--AGAC-ACCAGAA-CTCCTAGCTGGGACTCCTACAGACCCTGTACGGTT 36574 | | || |||| || |||| || | |||| | |||||||||||| | || || Sbjct 357 CAAGGAGCTGGAAGACGACGAGAAGCTGTT--CTGGAAG-CCTACAGACCCTATTCGATT 413 Query 36575 CGATAAGGAAGACTTGCTGGAGCGTGAGTTAGAGTACGGTAAGGCTGACTTCACTTTACA 36634 |||| | |||||| ||| ||||| || | || || |||| || |||| || |||| Sbjct 414 CGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACA 473 Query 36635 GTTCATGCTTAACCCTAACCTCAGTGACGCCGCTAAGTACCCTTT 36679 ||||||||| ||||| ||||| || ||| || |||||||| || Sbjct 474 GTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122173608069156