Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq44246 262 4e-65
seq54337 89.7 5e-13
>seq44246
Length=4029
Score = 262 bits (290), Expect = 4e-65
Identities = 937/1445 (65%), Gaps = 36/1445 (2%)
Strand=Plus/Plus
Query 93873 GGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAACGCGGGGACC--CCGGTGCCA 93930
||| ||| ||| ||| ||| |||| || || |||||||| || ||| |||| ||
Sbjct 432 GGAGAAGTGGTTCACCCACGCCTCCCCCACGCTCTTCAACGCAGGAACCAACCGG--CCT 489
Query 93931 CAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGAC 93990
||| | || || |||||| | || | |||| |||| |||| || || | ||||
Sbjct 490 CAGCTCTCCAGCTGCTTCCTGCTCACCATGAAGGACGACAGCATCGAGGGCATCTACGAC 549
Query 93991 AGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCAC 94050
| || ||| | ||||| |||||| || | || || |||||||| | ||| |
Sbjct 550 ACGCTGAAGCAGTGTGCACTCATCTCCAAGTCGGCAGGAGGAATCGGTGTGGCCGTCAGC 609
Query 94051 GACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTC 94110
| | || ||| || ||||||| ||| ||||| |||| ||||||||| || |||
Sbjct 610 TGCATCCGATCCACCGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGGCTGGTC 669
Query 94111 CCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGG 94170
|| ||||| |||||| ||||||| | || ||||| || |||||||| || | | |
Sbjct 670 CCCATGCTGAGGGTCTACAACAACACAGCACGCTATGTCGACCAGGGCGGCAACAAGCGA 729
Query 94171 AAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGAC 94230
|| | ||||| | || || ||||| |||||| |||||| | ||| | ||
Sbjct 730 CCCGGCGCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGACGTGTTCGACTTCCTGGAG 789
Query 94231 CTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGG 94290
||| |||||| || || || | |||| |||||||| |||||||||| | |||
Sbjct 790 CTGAAGAAGAACACGGGGAAGGAGGAGCAGAGAGCCAGAGATCTCTTCTACGGCTTGTGG 849
Query 94291 GTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCC 94350
| || ||||| || ||||| | || |||| ||| | |||| ||| | ||||||
Sbjct 850 ATCCCCGACCTGTTCATGAAGAGGGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCC 909
Query 94351 AATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGT 94410
| || | ||||| ||| ||| || || | ||||| | | || | |
Sbjct 910 AGCGAGAGCCCCGGGCTGGACGAGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCCAA 969
Query 94411 TACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATC 94470
|| || | ||||| || || | || || | ||| | || ||||| | |||
Sbjct 970 TATGAGCGGGAGGGCCGGGTCAAGCGTGTGGTGAAGGCTCAGCAGGTGTGGCACGCCATC 1029
Query 94471 GTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCC 94530
| || ||| |||| |||| ||||| ||||| ||| ||| ||| | ||||
Sbjct 1030 ATCGAGTCCCAGACGGAGTCGGGCACGCCGTACATGCTGTACAAAGACGCCTGCAACAGG 1089
Query 94531 AAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTC 94590
||| |||||||||| |||| || |||||| || || || ||||| || || ||
Sbjct 1090 AAGAGCAACCAGCAGAACCTGGGAACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTT 1149
Query 94591 GAGTATACTTCTCCGG--ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCA 94648
|| ||||| | || | ||| | ||||||||||| |||| ||||||| || || |
Sbjct 1150 GA--ATACTCCAGTGGCGATGAGGTCGCTGTGTGTAATCTGGCCTCCATCG--CTCTCAA 1205
Query 94649 CTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACT 94708
| | || || | || || ||| | ||| | |||| ||||| |
Sbjct 1206 CAT--GTACGTCACCCCCGAGCGG--ACTTTTGACTTCAAGAAACTGGAGTCTGTGACCA 1261
Query 94709 TCGCGGGAAG-GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTC 94767
||| ||| || ||||||||||| | | || || | ||||||||||| ||
Sbjct 1262 -------AAGTGATCGTGAAGAACCTGAACAAGATCATAGAGATTAACTTCTACCCGGTG 1314
Query 94768 CCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTC 94827
|| ||||| || | || ||| | || |||| ||||| |||||||||||||| |
Sbjct 1315 CCCGAGGCCGATCAGTCCAACAAGCGCCACAGGCCGATCGGTATCGGCGTCCAGGGCCTG 1374
Query 94828 GCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAAT 94887
|| ||||| | | |||||||| |||| || ||| || | ||||
Sbjct 1375 GCCGACGCCTTCATCCTGATGCGTTACCCCTTTGAAAGCCCCGAGGCCCAGCTGCTGAAC 1434
Query 94888 TTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAG 94946
| | || || || | ||| || |||| ||| || | | | | | ||| ||||
Sbjct 1435 ATCCAGATCTTTGAGACCATCTACTACGCCGCCCTGGAGGCCAGCTGCGAACT-GGCCG- 1492
Query 94947 ATCGGACGGCGGGCCAC-ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTC 95005
| || | ||||| | |||| ||| | | || || ||| | ||||||| | |
Sbjct 1493 --CCGA-GCTGGGCCCCTACGACACGTAC-GAGGCTCCCCCGTCAGCAAGGGCATCCTCC 1548
Query 95006 AGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCG 95062
||| |||| | |||| || |||| | | |||| |||||| ||||| || | | |
Sbjct 1549 AGTACGACATGTGGGAGAAGACGCCCACCGACCTGTGGGACTGG-AAGCTGCTGAAGGAG 1607
Query 95063 CTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCT 95122
||| ||| ||||| |||| ||| ||||| ||||||| |||||||||||||
Sbjct 1608 AAGATCGC--CAAGCACGGCGTGAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCT 1665
Query 95123 CCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182
|||| || |||||||| |||||||||||||| |||| ||| |||| |||| | ||||
Sbjct 1666 CCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACA 1725
Query 95183 ACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGA 95242
| | ||||| || | || || |||| || ||||| || || || ||||||||
Sbjct 1726 CCCGCCGGGTCCTGTCAGGAGAGTTCCAGATCGTCAACCCCCATCTGCTCAAGGACCTGA 1785
Query 95243 CGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCG 95302
|| || ||||||| || || | |||||||| ||| | | |||||| |||
Sbjct 1786 CGGAGAGAGGGCTGTGGGGCGAGGAGATGAAGAACCAGCTGATCGGTAACAACGGATCCA 1845
Query 95303 TCCAG 95307
| |||
Sbjct 1846 TTCAG 1850
>seq54337
Length=1748
Score = 89.7 bits (98), Expect = 5e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136
||||| || | ||| ||||| |||||||||||||||| || ||||| || ||||||
Sbjct 1235 CACGGCGTAAGGAACAGTCTGCTGTTGGCCCCCATGCCCACAGCTTCCACTGCCCAGATC 1294
Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196
|| |||||||| ||||| | || || | |||| |||| | |||| | | ||||||||
Sbjct 1295 CTGGGCAACAATGAGTCCATTGAGCCGTACACCAGCAACATCTACACCCGCAGGGTGCTC 1354
Query 95197 GCCGGGGAATTCCCCGTCATCA 95218
| || || || | |||| ||
Sbjct 1355 TCTGGAGAGTTTCAGGTCAGCA 1376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 491473474611920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |