Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq512585 123 7e-24 >seq512585 Length=488 Score = 123 bits (136), Expect = 7e-24 Identities = 123/156 (79%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 43277 AGCCGGCGCGGAAG--GCTATCGCAGACCGGGAGCGGAGGGAGATCAGGGTTCGGAAGGA 43334 ||| |||||| ||| ||| | ||| || |||| ||||||||| |||||| ||||| Sbjct 284 AGCGGGCGCGCAAGTCGCTGGCTCAGGTCG--AGCGCCGGGAGATCAAGGTTCGCAAGGA 227 Query 43335 GCGGCTGAAGAGCAGGGCGGATCACCTGCGCGAGGCTCAAGCTGCGTTCAACGAGTTCAT 43394 | | |||||||||||||||||||||||||| |||| |||| | || | ||||| ||||| Sbjct 226 GAGACTGAAGAGCAGGGCGGATCACCTGCGTGAGG-TCAAACCGCCGTGAACGAATTCAT 168 Query 43395 TCGCCTGCGCGACGCCGACCAGCCGTGCATCAGTTG 43430 ||||||||| |||| || ||| |||||||| || Sbjct 167 TCGCCTGCGTGACGATCACTTGCCATGCATCAGCTG 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148933568294616