Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011534.1 Length=39472 Score E Sequences producing significant alignments: (Bits) Value seq512931 168 2e-37 >seq512931 Length=538 Score = 168 bits (186), Expect = 2e-37 Identities = 373/545 (68%), Gaps = 52/545 (10%) Strand=Plus/Plus Query 37269 CCCGACCACTCACCTTCTGTGAAGTCCGTGGGTATTACTGGTCAGT-TGACTGGTAGCCG 37327 || |||||| || || ||||||||||||||| ||||||| | || ||||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 37328 TGCTGACATTATCATCGCAGATGACGTGGAGGTTCCCGGTAATAGCTCT---ACTAGCTC 37384 ||||||||| |||| || |||||||| ||||| ||||| || |||| || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAA---CTCTGGCACACAGTC 125 Query 37385 TGCTCGTGAGAAGCTGTGGACAT-TGGTTACTGAGTTCGCTGCATTGCTTAAGCCGTTGC 37443 || | || | || ||| | |||| | || |||| ||| | || ||||| || Sbjct 126 CGCAAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TGA 182 Query 37444 C--TACTAGCCGTGTTATCTACCTTGGGACACCACAAACCGAGATGACGCTCTACAAGGA 37501 | ||| | | |||||| | || || ||||| ||||| ||||| ||||||| ||| Sbjct 183 CGGTACGATC------ATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGA 236 Query 37502 ACTGGAAGATAACAAAGGGTACTCTACGGTAATCTGGCCTGCACAGTATCCACGCAACGA 37561 ||| || || | || ||||| ||| ||||||||||||| || || || | | Sbjct 237 ACTTGAGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGT 293 Query 37562 CGCTGA----GGCTCTCTACT---------ATGGCGACCGCTT--GGCT---CCT----A 37599 ||||| | || ||||| | ||| | |||| | || ||| | Sbjct 294 GGCTGACCTTGAGTC-CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCA 352 Query 37600 TGCTGAAGGCTGAGTATGATGAAGGCTTTGAGTTACTCCGTGGTCAACCTACTGACCCTG 37659 |||| |||| || || || | | || | || ||| | ||||| |||||| Sbjct 353 TGCTCAAGG---AGCTGGAAGACGACGAGAAGCTGTTC--TGGA-AGCCTACAGACCCTA 406 Query 37660 TTCGATTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGTAAAGCTGGTTACA 37719 ||||||||||| || ||||| ||||| || |||||| |||||| || | ||| | | Sbjct 407 TTCGATTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCG 466 Query 37720 CGCTACAGTTCATGCTAAACCCTAACCTGAGTGATGCCGAGAAGTACCCTCTGAGGCTCC 37779 | |||||||||||||| ||||| ||||| || || |||||||||||| ||| ||| | Sbjct 467 CTCTACAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGC 526 Query 37780 GTGAT 37784 ||||| Sbjct 527 GTGAT 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125401339457016