Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_011811.1 Length=84576 Score E Sequences producing significant alignments: (Bits) Value seq309203 118 6e-22 seq437693 100 2e-16 >seq309203 Length=1072 Score = 118 bits (130), Expect = 6e-22 Identities = 195/279 (70%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 50973 AGAAATGAGCCGTGGCACAACCGACCTGTTCATACACCCTTCTTAGGTGGTATCAACCAG 51032 |||||||| |||| || ||| ||||| | ||||| || | || | | | ||| | Sbjct 756 AGAAATGAACCGTTCCATAACAGACCTATACATACTCCACTAGGAGATATTGTAAACAAC 815 Query 51033 CTTGGTAACGCAGCCGATGCTGAAGTTTGGTTCACAGATGCTTGTTATCTCCTGTACCGT 51092 || ||||| || ||||||| ||| ||||||||| |||||| |||||||| || | Sbjct 816 CTAGGTAATGCTGCCGATGGTGAGGTTTGGTTCTTAGATGCGTGTTATCTTCTTTGGAAG 875 Query 51093 ATCACTGGTGAAGAGAAGTACAAAACTGCACTGGAAAGTGTATTCTTCACAGCGAACGAA 51152 ||||| | || | ||||| | || | || |||||| | |||||| || || Sbjct 876 GCTACTGGCAAGGATCACTACAAGAAGGCTTTAGATAGTGTACATTACACAGCCAATGAG 935 Query 51153 TATACAGAGATTGACTCAACTGACAAGTTTTTCCGTCAAAGTCTTT-CTGCTGAGACACC 51211 |||||| |||||||| ||| | ||||| |||||| | || | | | ||| | ||||| Sbjct 936 TATACATTCATTGACTCTACTAATAAGTTCTTCCGT-AGAGACATGACAGCTAACACACC 994 Query 51212 TTTTACGGATGCTATCAGTTATGGGTTCTCATACCCTGC 51250 |||||| || | ||| ||||| | | ||| ||||| || Sbjct 995 TTTTACCGAAGGTATTAGTTACGACTACTCTTACCCCGC 1033 Score = 91.5 bits (100), Expect = 8e-14 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 49839 TGGGATGCCTATATCAACTATTTCTACAAAGGTCAGGAAATCCCTTCCACACCATCTCGT 49898 ||||| || ||| | || ||||| ||||| ||| || ||| |||||| ||| Sbjct 237 TGGGAGGCGTATGTACGCTGGTTCTATAAAGGACAGCCTATTCCTGACACACCTCAACGT 296 Query 49899 TACATCTGTAACTGGATTATCAACGGGAAACAACCTACCCTTGCAGACTATCCAGTAAAC 49958 | | |||||||||||||| || || || | ||| || ||| |||||||| | ||| Sbjct 297 TGGGTTTGTAACTGGATTATAAATGGTAAGGAGCCTGTACTGGCAAACTATCCACTCAAC 356 Query 49959 CCCGAAGAGCCTACTCAGGGTGGATTCAAATGCGTCCCTATCGAGTTCACTAACGGTGTT 50018 ||| || |||||||| ||||| ||||| | | || | | | |||||||| || Sbjct 357 CCCATTGACCCTACTCATGGTGGTTTCAAGGGTATACCACTAAACTGGACTAACGGACTT 416 Query 50019 GGTCGAATTCCTCATGGTGCTCCTTTTTGGGGTGAATA 50056 ||||||| | |||||||||| |||||||| || Sbjct 417 ACCAAAATTCCTAAGGGTGCTCCTTACTGGGGTGAGTA 454 >seq437693 Length=1718 Score = 100 bits (110), Expect = 2e-16 Identities = 185/268 (69%), Gaps = 10/268 (4%) Strand=Plus/Plus Query 50923 TTAACTATGCTTCTAAAGT--TCCTGTTGATTTTGGTGGTTACGAGTTTGCAAGAAATGA 50980 |||||| |||| | | || |||||| || |||||||||| ||| |||||||| Sbjct 931 TTAACTTTGCTAC--ACGTAATCCTGTAGAGCATGGTGGTTACATCATTGACAGAAATGA 988 Query 50981 GCCGTGGCACAACCGACCTGTTCATACACCCTTCTTAGGTGGTATC---AACCAGCTTGG 51037 ||| | || ||| |||| | || || ||||| ||||| || || | | || Sbjct 989 GCCATTCCATAACAGACCATTGCACACTCCCTT---AGGTGAGATTGTGAATAACATGGG 1045 Query 51038 TAACGCAGCCGATGCTGAAGTTTGGTTCACAGATGCTTGTTATCTCCTGTACCGTATCAC 51097 |||||| || |||| |||||| |||||| |||||||||||| | ||| | || Sbjct 1046 TAACGCTGCTGATGGTGAAGTATGGTTCTTAGATGCTTGTTACTTAATGTGGAAAGTTAC 1105 Query 51098 TGGTGAAGAGAAGTACAAAACTGCACTGGAAAGTGTATTCTTCACAGCGAACGAATATAC 51157 ||| ||| |||||||| | ||| |||| |||| || |||||||||||||| || Sbjct 1106 CGGTAGAGAAAAGTACAAGAAGGCATTGGACTGTGTTCATTTTACAGCGAACGAATACAC 1165 Query 51158 AGAGATTGACTCAACTGACAAGTTTTTC 51185 | || ||||| | | | || |||||| Sbjct 1166 ATTCATCGACTCTAGTAATAAATTTTTC 1193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 268785849859614