Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_012635.1
Length=168394
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 190 2e-43
seq506238 143 3e-29
seq509673 109 6e-19
seq487923 107 2e-18
seq351952 105 7e-18
seq511551 91.5 2e-13
seq510909 86.0 7e-12
seq326422 86.0 7e-12
>seq449735
Length=3187
Score = 190 bits (210), Expect = 2e-43
Identities = 494/741 (67%), Gaps = 23/741 (3%)
Strand=Plus/Minus
Query 140401 TTTGTTGGAATAGCAATTTCACAGCACAAGTTACTCTGACGAATAGGTGCCTTTTCACGA 140460
|| ||||| | |||||||| | || || ||| || |||||||||||| || | |
Sbjct 755 TTAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCA 696
Query 140461 ATAAACGGAGTATAGTTATTCGTATTATCAATGAACTGTACATAAATCCTTGCTGTTCCT 140520
|| ||||| | | |||| | |||| | |||| ||||| | | || | |
Sbjct 695 ATGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTT 636
Query 140521 GAGCGTTCAGTCATGAGCAA---TTCA-AATAGTTCACGAGCTTTAATACGCTTTTTACG 140576
| ||||| || |||| || | || |||||| ||||||||| || ||||||||
Sbjct 635 GCACGTTCT----TGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACG 580
Query 140577 AAT--ATTAGGGTCTTTTTCTGCTGCTTCGTATAATTCACGG-AAACG-GTCTTGGTCTT 140632
||| ||| | |||| ||| | | | |||| | || |||| |||||||||||
Sbjct 579 AATTGATTCG--TCTTGTTCGTATTTTAC--ATAAAGCGCGTCAAACTCGTCTTGGTCTT 524
Query 140633 TAAAATAAGAATAATAAAGCTCTCCGCCCATTTCATGGGGACTGAACAAAGTAATGTAAT 140692
|||| | | || ||||| || || ||| || ||| || ||||| |||||||| |
Sbjct 523 CAAAAAATGCATCGTAAAGGCCTG-GCACAT--CAGAGGGGCTAAACAAGGTAATGTAGT 467
Query 140693 CGTTCTTTCCAAAACGTTCCATCATCAAATCATTCAGTTGAACACCATAATCCATATGAC 140752
||| || ||||| ||| | | ||| | || || || ||||| | |||||
Sbjct 466 CGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGAC 407
Query 140753 GAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAAACAAGAAGATTTTCAACTTCCA 140812
| | |||||| || || || || ||||||||| | || | || ||||| ||||| |
Sbjct 406 GCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTA 347
Query 140813 AATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGAATTCCACCCTGTGAGCA 140870
||||||||| || || | ||| || || ||||||||||| | || || || || ||
Sbjct 346 AATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACA 289
Query 140871 TGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATAACACCAGTATGGCGTACTTC 140930
|||||| || || ||||| || || ||||||||||| ||| |||||| ||||
Sbjct 288 GCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTC 229
Query 140931 ACCCATGCCAATCTTAGAACCTTCAGCACGAATCATACCAACGTTAATACCAATTCCAGC 140990
|| ||| ||| | ||| |||||||| ||| ||||||| ||||| || ||
Sbjct 228 GCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGC 169
Query 140991 GCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTATTGATAGACTTTAATGAATC 141050
|||| || | |||| |||||||| || || | || || || | | ||
Sbjct 168 ACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTC 109
Query 141051 ACCTGCCTCAATAACAACGCATGAACTAAACTGCCGAGTTGGAGTACGGCAACCAGCCAT 141110
|| ||| || | || || || |||||||| || ||||| ||||| ||| |||||
Sbjct 108 GCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCAT 49
Query 141111 AATAGGAGTTGGTAATGAAAT 141131
||| || || |||| ||||||
Sbjct 48 AATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 143 bits (158), Expect = 3e-29
Identities = 142/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 63140 ATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 63199
||||||| | || ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 63200 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 63259
||||||| || ||||| ||||| |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 63260 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 63319
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 63320 CTTC 63323
||||
Sbjct 218 CTTC 221
>seq509673
Length=441
Score = 109 bits (120), Expect = 6e-19
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 140731 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCA-A 140789
|| || || |||||||||||||| | ||||| ||||| ||||| |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 140790 AACAAGAA-GATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGC 140848
| ||| || || |||||||| |||||||| | || ||| | || || || ||||
Sbjct 288 ACCAATAATGA--CTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGC 345
Query 140849 CACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAA 140908
|||| | || || |||||||| ||||||||||||| || || |||| | || || |
Sbjct 346 CACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGA 405
Query 140909 TAACACCAGTATG 140921
|| ||| |||||
Sbjct 406 TACAACCCGTATG 418
>seq487923
Length=1072
Score = 107 bits (118), Expect = 2e-18
Identities = 150/202 (74%), Gaps = 9/202 (4%)
Strand=Plus/Minus
Query 23802 ATACTAATTTATCTAATACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 23861
||| |||||||| |||| || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTAT---ATACATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 23862 CGTCATTTGAGCGCATGCTT-ACTAC-TGCATTGACTTTCTTATCACGAATCAGGTACT- 23918
||||| ||||||| || || || | | ||| | ||| ||||||||||| | ||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAA-TTTATTATCACGAATAAA-TACTT 415
Query 23919 GTACTGTATTAGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAATTGCATGG 23978
| || |||||||||| || ||||||||||| ||| |||| | ||| ||| || |
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 23979 ATGGACGAGTATAAATCATGAT 24000
| || | |||||||||||| ||
Sbjct 354 AAGGTCTAGTATAAATCATAAT 333
>seq351952
Length=416
Score = 105 bits (116), Expect = 7e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 63154 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 63213
||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 63214 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 63273
|| ||||| |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 63274 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63326
| ||||||| || || |||||||| | ||||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq511551
Length=634
Score = 91.5 bits (100), Expect = 2e-13
Identities = 201/294 (68%), Gaps = 18/294 (6%)
Strand=Plus/Minus
Query 43720 AGAATCTAATGCGATACGAGGAAGATTCAGTGTTACAACACCGAGATTATTACGTCCATC 43779
||| | || ||| | |||||| || || | |||| ||||| | || |||||||||||
Sbjct 508 AGATTGTAGTGCAACACGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATC 449
Query 43780 AAGAATTTCATTGCCAGTCGAATCTTTCCATACGCTCAA--GAAACTACGACAACCCAT- 43836
|| | ||| || |||| || ||||| |||| ||| | ||| || | || |||||
Sbjct 448 AAACACTTCCTTACCAGAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATG 391
Query 43837 --TGGAGAAACAGGAACAGATGAACCAGTGATAGCTTTATTGTTCTTAGCTGAAATAATA 43894
|| || | | ||| |||| | | ||| || ||| ||| |||||
Sbjct 390 CTTGCCTTAAAACCACCAGT--AACCTCTACAATCTTA-----TCGTAGTTGA--TAATA 340
Query 43895 TCAGGATACATCCTTTTGCTTGCACACTCTAAAGCAAGCTGCTTAATATCATAGTTCGGA 43954
||||| ||||| | || || |||||||||| ||| | ||| ||||||| |||||| ||
Sbjct 339 TCAGGGTACATACGCTTACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGG 280
Query 43955 TCGTCTT-TATAAAGATTAACACCTTCTTCAACAAACATAACAAGCTTAGGGAA 44007
|| || | | ||||| || ||||| |||| || | | | ||||||||||||
Sbjct 279 TCTTCCTGTTTAAAG-TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227
>seq510909
Length=431
Score = 86.0 bits (94), Expect = 7e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 63142 TACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAG 63201
|||| ||| | |||||| ||||||| || ||||| ||||||| || ||||| || |
Sbjct 339 TACATACTTTTAGTAAATGTACGAGTAATCACGTCTTGCTGCTGCTCAGGAGTGAGCGCA 398
Query 63202 TTAAAGCGAACTGCATAACCGGATACACGGAT 63233
||||||||||| |||||||| |||||||| ||
Sbjct 399 TTAAAGCGAACGGCATAACCCGATACACGAAT 430
>seq326422
Length=2068
Score = 86.0 bits (94), Expect = 7e-12
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 72409 CATAAATTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTA 72468
|||||| |||||||| | | ||||||||| | ||||||||| ||||||| ||||||||
Sbjct 323 CATAAACTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTA 382
Query 72469 ATA-CCATTATACGATATCCGC 72489
||| |||||||||||| ||||
Sbjct 383 ATAGCCATTATACGATGCCCGC 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535193985451680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |