Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_012696.1 Length=73325 Score E Sequences producing significant alignments: (Bits) Value seq514610 98.7 5e-16 seq512587 86.0 3e-12 >seq514610 Length=413 Score = 98.7 bits (108), Expect = 5e-16 Identities = 161/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 30624 TGCAAAGCTCATCAAAGAATGCTTTGAAGCTCCTCCCGGATGGCTCTTTGTAGGT-CTAG 30682 |||||||| ||||||| || ||| ||| || |||||| |||| || || || | Sbjct 71 TGCAAAGCACATCAAACGCTGTTTTAGAGCGCCAGATGGATGGTTCTTAGTTGGGGCTGG 130 Query 30683 ACTTTGACTCACTTGAAGACAGAATCTCTGCACTCCAGACAAAAGATCCCGAAAAACTGA 30742 |||| | ||| | || || |||||||||||||| || || || ||| | ||| | | Sbjct 131 ACTTCGCCTCGTTAGAGGATAGAATCTCTGCACTAACAACCAAGGACCCCAATAAATTAA 190 Query 30743 AGGTTTATACCGATGGTTACGATGGTCACTCTCTACGGGCCTATGGTTACTTTGGTGATC 30802 | ||||| || ||||| || ||||| || | |||| || | |||| ||||| | | Sbjct 191 AAGTTTACACAGATGGCTATGATGGCCATTGCTTACGAGCATTCAGTTATTTTGGGCAAC 250 Query 30803 AGATGCCAGATATCGACCCTTCTTCTGTGGATTCGATCAACTCCATTGCGA 30853 | ||||| ||||| ||| | |||||| || || || || ||||||| Sbjct 251 ATATGCCTGATATTGACGGAAGTAGTGTGGACTCTATTAATTCTATTGCGA 301 >seq512587 Length=355 Score = 86.0 bits (94), Expect = 3e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 30681 AGACTTTGACTCACTTGAAGACAGAATCTCTGCACTCCAGACAAAAGATCCCGAAAAACT 30740 ||||||| || | ||||| ||||| || || || || ||||| | || || Sbjct 198 AGACTTTTCATCTTTAGAAGATAGAATTTCAGCTCTAACAACTCGTGATCCAAATAAGCT 257 Query 30741 GAAGGTTTATACCGATGGTTACGATGGTCACTCTCTACGGGCCTATGGTTACTTTGGTGA 30800 ||||| || ||||||||||| |||||||||| |||||| |||||| |||||| || | Sbjct 258 AAAGGTGTACACCGATGGTTATGATGGTCACTGTCTACGAGCCTATTCTTACTTCGGGCA 317 Query 30801 TCAGATGCCAGATAT 30815 | |||||||||||| Sbjct 318 TATGATGCCAGATAT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233013234356692