Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_012697.1 Length=74611 Score E Sequences producing significant alignments: (Bits) Value seq514610 116 2e-21 seq512587 91.5 7e-14 >seq514610 Length=413 Score = 116 bits (128), Expect = 2e-21 Identities = 164/229 (72%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 32337 TGCAAAGCTCATCAAAAAATGCTTTGAAGCTCCTCCCGGATGGCTCTTTGT-GGGTCTCG 32395 |||||||| ||||||| || ||| ||| || |||||| |||| || ||| || | Sbjct 71 TGCAAAGCACATCAAACGCTGTTTTAGAGCGCCAGATGGATGGTTCTTAGTTGGGGCTGG 130 Query 32396 ACTTCGACTCATTAGAAGACAGAATCTCTGCTCTTCAAACCAAAGACCCAGAAAAACTGA 32455 |||||| ||| ||||| || ||||||||||| || |||||| ||||| | ||| | | Sbjct 131 ACTTCGCCTCGTTAGAGGATAGAATCTCTGCACTAACAACCAAGGACCCCAATAAATTAA 190 Query 32456 AGGTGTATACGGATGGTTACGATGGTCACTCTCTACGGGCCTATGGTTATTTTGGCGATC 32515 | || || || ||||| || ||||| || | |||| || | |||||||||| | | Sbjct 191 AAGTTTACACAGATGGCTATGATGGCCATTGCTTACGAGCATTCAGTTATTTTGGGCAAC 250 Query 32516 AAATGCCAGATATCGACCCTTCTTCTGTGGATTCAATCAACTCGATTGC 32564 | ||||| ||||| ||| | |||||| || || || || ||||| Sbjct 251 ATATGCCTGATATTGACGGAAGTAGTGTGGACTCTATTAATTCTATTGC 299 >seq512587 Length=355 Score = 91.5 bits (100), Expect = 7e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32404 TCATTAGAAGACAGAATCTCTGCTCTTCAAACCAAAGACCCAGAAAAACTGAAGGTGTAT 32463 || |||||||| ||||| || ||||| ||| || ||| | || || |||||||| Sbjct 208 TCTTTAGAAGATAGAATTTCAGCTCTAACAACTCGTGATCCAAATAAGCTAAAGGTGTAC 267 Query 32464 ACGGATGGTTACGATGGTCACTCTCTACGGGCCTATGGTTATTTTGGCGATCAAATGCCA 32523 || |||||||| |||||||||| |||||| |||||| ||| || || || |||||| Sbjct 268 ACCGATGGTTATGATGGTCACTGTCTACGAGCCTATTCTTACTTCGGGCATATGATGCCA 327 Query 32524 GATAT 32528 ||||| Sbjct 328 GATAT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237102078329384