Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq449735 165 9e-36 seq509673 136 4e-27 >seq449735 Length=3187 Score = 165 bits (182), Expect = 9e-36 Identities = 321/467 (69%), Gaps = 8/467 (2%) Strand=Plus/Minus Query 139634 GGACTAAACAGAGTAATGTAATCCCGTTTAAGGAATCGCTCTACCATCAGGTTATTAATC 139693 || ||||||| |||||||| || ||||| || ||| ||| || ||||||| | Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429 Query 139694 TGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTGTTCTTTAAC 139753 |||||||||||||| | |||||| | |||||| || || ||||| || || || | Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369 Query 139754 ACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCCGCCCCGCCA 139813 || | ||| |||| | ||||||||||| | ||||| | | || || || |||||| Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309 Query 139814 CGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAGAATGGGATA 139873 || | |||||||| || || ||||| || || ||||| || || | || || ||| Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATA 249 Query 139874 ACGCCAGTATG--ACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGAATCATGC 139931 || ||||| ||| |||| |||| | || | || || ||||| | Sbjct 248 CAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGAC 191 Query 139932 CAGCGTTGATACCGATACCAGCACGCTTGCTA-ATATACTTGATGATTGCATTTGCTGTT 139990 | ||||| || || || || ||||| |||| | | || || | |||||| | || Sbjct 190 CTGCGTTAATGCCAATGCCGGCACG-TTGCGATACGTATTTAACAATTGCAGACGAGGTG 132 Query 139991 TCGTTGATGCCCTGCAATG-AGTCATCACTTTCGATCACCACACACGAACTAAATTGGCG 140049 |||| || | ||| | ||| ||| || || | |||||||| ||||| ||||| Sbjct 131 GCGTTAATTGAAT-CAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCG 73 Query 140050 TGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGATTT 140096 |||||| ||||| |||||||||||||| || |||||||| || |||| Sbjct 72 TGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTT 26 >seq509673 Length=441 Score = 136 bits (150), Expect = 4e-27 Identities = 155/204 (76%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 139685 TTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCC---TTA 139741 ||||| | ||||||||||||||| | |||||| | ||||| |||||||| || ||| Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278 Query 139742 TTGTTCTTTAACAC-AATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGT 139800 || ||| || || ||| |||| ||| ||||||||||||| ||||||| | | || Sbjct 279 TTTTTCAGTACCAATAAT--GACT--CAACTTCTAAATGCCATAATGGGTAAAACAACGT 334 Query 139801 CGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTT 139860 ||| || |||||||| | ||||||||||||||| | ||||| || || || || |||| Sbjct 335 CGCTGCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTT 394 Query 139861 CCAGAATGGGATAACGCCAGTATG 139884 ||||||||||| || ||||| Sbjct 395 ATAGAATGGGATACAACCCGTATG 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528912321129760