Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_012740.1
Length=166418
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 165 9e-36
seq509673 136 4e-27
>seq449735
Length=3187
Score = 165 bits (182), Expect = 9e-36
Identities = 321/467 (69%), Gaps = 8/467 (2%)
Strand=Plus/Minus
Query 139634 GGACTAAACAGAGTAATGTAATCCCGTTTAAGGAATCGCTCTACCATCAGGTTATTAATC 139693
|| ||||||| |||||||| || ||||| || ||| ||| || ||||||| |
Sbjct 488 GGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAAC 429
Query 139694 TGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTGTTCTTTAAC 139753
|||||||||||||| | |||||| | |||||| || || ||||| || || || |
Sbjct 428 TGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGT 369
Query 139754 ACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGTCGCCGCCCCGCCA 139813
|| | ||| |||| | ||||||||||| | ||||| | | || || || ||||||
Sbjct 368 ACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCA 309
Query 139814 CGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTTCCAGAATGGGATA 139873
|| | |||||||| || || ||||| || || ||||| || || | || || |||
Sbjct 308 CGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATA 249
Query 139874 ACGCCAGTATG--ACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGAATCATGC 139931
|| ||||| ||| |||| |||| | || | || || ||||| |
Sbjct 248 CAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGAC 191
Query 139932 CAGCGTTGATACCGATACCAGCACGCTTGCTA-ATATACTTGATGATTGCATTTGCTGTT 139990
| ||||| || || || || ||||| |||| | | || || | |||||| | ||
Sbjct 190 CTGCGTTAATGCCAATGCCGGCACG-TTGCGATACGTATTTAACAATTGCAGACGAGGTG 132
Query 139991 TCGTTGATGCCCTGCAATG-AGTCATCACTTTCGATCACCACACACGAACTAAATTGGCG 140049
|||| || | ||| | ||| ||| || || | |||||||| ||||| |||||
Sbjct 131 GCGTTAATTGAAT-CAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCG 73
Query 140050 TGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGATTT 140096
|||||| ||||| |||||||||||||| || |||||||| || ||||
Sbjct 72 TGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTT 26
>seq509673
Length=441
Score = 136 bits (150), Expect = 4e-27
Identities = 155/204 (76%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 139685 TTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCC---TTA 139741
||||| | ||||||||||||||| | |||||| | ||||| |||||||| || |||
Sbjct 219 TTATTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTA 278
Query 139742 TTGTTCTTTAACAC-AATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAGAGT 139800
|| ||| || || ||| |||| ||| ||||||||||||| ||||||| | | ||
Sbjct 279 TTTTTCAGTACCAATAAT--GACT--CAACTTCTAAATGCCATAATGGGTAAAACAACGT 334
Query 139801 CGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATGTTT 139860
||| || |||||||| | ||||||||||||||| | ||||| || || || || ||||
Sbjct 335 CGCTGCACCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTT 394
Query 139861 CCAGAATGGGATAACGCCAGTATG 139884
||||||||||| || |||||
Sbjct 395 ATAGAATGGGATACAACCCGTATG 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 528912321129760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |